Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 IMMTP1-201ENST00000435590 2219 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 RNA5SP273-201ENST00000362484 113 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 RPL5P19-201ENST00000404228 893 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AL034374.1-201ENST00000406329 351 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 PTGES3P2-201ENST00000407942 482 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 MYL6P5-201ENST00000412707 459 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 BMS1P10-201ENST00000443754 1120 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 SYT14P1-201ENST00000481459 721 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC008410.1-201ENST00000483777 339 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC012123.2-201ENST00000485809 248 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC008629.2-201ENST00000503783 483 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 Y_RNA.667-201ENST00000516212 107 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 RNA5SP438-201ENST00000516561 112 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AL358913.1-201ENST00000554342 121 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 MIR4776-2-201ENST00000580204 80 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 MIR132-201ENST00000591554 101 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 uc_338.26-201ENST00000612659 160 ntBASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRRTM4Q86VH4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AL662795.2-201ENST00000624252 3706 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AC023490.2-201ENST00000359859 470 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 HMGN1P20-201ENST00000411849 300 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 TATDN1P1-201ENST00000414123 891 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AC015977.1-201ENST00000418887 292 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 BX284632.2-201ENST00000421091 399 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 HSPE1P16-201ENST00000426640 348 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AL731534.1-201ENST00000434711 269 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 VN1R110P-201ENST00000438988 971 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AL512605.1-202ENST00000441919 381 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AL359955.2-201ENST00000445380 353 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AL162739.1-201ENST00000450606 307 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AL122020.1-201ENST00000472287 459 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AC073610.1-201ENST00000489971 396 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 RNU6-1102P-201ENST00000516149 96 ntBASIC5.88□□□□□ -1.47
LRRTM4Q86VH4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms