Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ZNF43-202ENST00000357491 5249 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 RNA5SP332-201ENST00000391063 115 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 SNORA48.7-201ENST00000391302 135 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 AC138907.8-201ENST00000623981 2256 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 AC119751.6-201ENST00000416712 186 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 RPL12P34-201ENST00000424532 479 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 OR8G5-201ENST00000524943 1041 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 PARP1P2-201ENST00000556806 195 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
VPS13CQ709C8 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 SNORA70F-201ENST00000384142 135 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 ST13P16-201ENST00000401760 781 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 CHEK2P3-201ENST00000416118 248 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 IGKV1-32-201ENST00000519290 311 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 AC073091.2-201ENST00000603205 907 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 AC099654.2-201ENST00000433031 1980 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
VPS13CQ709C8 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.28□□□□□ -1.73
VPS13CQ709C8 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 SNORD113.2-201ENST00000364166 89 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 MIR105-1-201ENST00000385222 81 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 RPL12P43-201ENST00000420608 499 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 HSPD1P12-201ENST00000429127 1069 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 EEF1A1P1-201ENST00000447052 739 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 VPS8-227ENST00000625842 4969 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 TNC-210ENST00000535648 7508 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 TMEM183AP1-205ENST00000432739 290 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 AC099654.6-201ENST00000636487 512 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 OR8B1P-202ENST00000641132 1178 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 AC104118.1-201ENST00000607625 1589 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 ERG-206ENST00000398911 4914 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 OR7E25P-202ENST00000641088 5937 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 OR9G4-201ENST00000302957 984 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 HSPA8P15-201ENST00000401676 786 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 RNGTTP1-201ENST00000420965 728 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 AL645608.4-201ENST00000423619 154 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms