Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 DDX18P5-201ENST00000534547 1306 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLRN1P58418 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.75□□□□□ -1.49
CLRN1P58418 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 AC008549.2-201ENST00000333482 706 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLRN1P58418 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 Y_RNA.436-201ENST00000384097 102 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 RNU6-83P-201ENST00000384568 112 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.75□□□□□ -1.49
CLRN1P58418 RNU4-72P-201ENST00000410754 173 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.75□□□□□ -1.49
CLRN1P58418 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC005345.1-201ENST00000431868 217 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 PA2G4P6-201ENST00000438325 1197 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 MTCYBP12-201ENST00000440559 1134 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC234771.4-201ENST00000441416 730 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 RPL34P26-201ENST00000445636 354 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC104978.1-201ENST00000449387 391 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.75□□□□□ -1.49
CLRN1P58418 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.75□□□□□ -1.49
CLRN1P58418 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.75□□□□□ -1.49
CLRN1P58418 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.75□□□□□ -1.49
CLRN1P58418 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.75□□□□□ -1.49
CLRN1P58418 AC106800.3-201ENST00000511389 308 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 RNA5SP96-201ENST00000516041 107 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 IGKV1D-22-201ENST00000518953 324 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 OR9G2P-201ENST00000533326 880 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 AC244502.2-201ENST00000543361 851 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.75□□□□□ -1.49
CLRN1P58418 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CLRN1P58418 AC027796.1-201ENST00000575593 512 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.75□□□□□ -1.49
CLRN1P58418 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.75□□□□□ -1.49
CLRN1P58418 NBR2-204ENST00000587322 63 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.75□□□□□ -1.49
CLRN1P58418 DPRXP5-201ENST00000604662 539 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC114477.1-201ENST00000605097 605 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC024589.2-201ENST00000605642 1294 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.75□□□□□ -1.49
CLRN1P58418 AP000255.1-201ENST00000610276 676 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AL158062.1-201ENST00000619632 745 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC015660.5-201ENST00000623238 564 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AP001962.1-201ENST00000624114 559 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLRN1P58418 AC007671.2-201ENST00000637344 619 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 NCOA4P2-201ENST00000340589 1813 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 AP000866.6-201ENST00000638898 3579 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.75□□□□□ -1.49
CLRN1P58418 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 NAMPTP1-201ENST00000440465 2514 ntBASIC5.75□□□□□ -1.49
CLRN1P58418 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CLRN1P58418 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CLRN1P58418 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLRN1P58418 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC011455.2-201ENST00000599320 3336 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC053481.2-202ENST00000582394 1500 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 BX005019.1-201ENST00000561881 1810 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CLRN1P58418 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.74□□□□□ -1.49
CLRN1P58418 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 OR56A4-201ENST00000330728 1209 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 SNORD116-9-201ENST00000384000 95 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 SNORD116-3-201ENST00000384287 95 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms