Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX2P48431 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX2P48431 CR788268.1-201ENST00000603931 1809 ntBASIC5.34□□□□□ -1.55
SOX2P48431 KARSP1-201ENST00000451871 1752 ntBASIC5.34□□□□□ -1.56
SOX2P48431 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SOX2P48431 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SOX2P48431 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SOX2P48431 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.34□□□□□ -1.56
SOX2P48431 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.34□□□□□ -1.56
SOX2P48431 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.34□□□□□ -1.56
SOX2P48431 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
SOX2P48431 AL133243.2-201ENST00000610331 1621 ntBASIC5.34□□□□□ -1.56
SOX2P48431 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SOX2P48431 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX2P48431 AL161756.3-201ENST00000641216 2071 ntBASIC5.33□□□□□ -1.56
SOX2P48431 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX2P48431 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX2P48431 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX2P48431 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SOX2P48431 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX2P48431 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SOX2P48431 RNU1-49P-201ENST00000363468 159 ntBASIC5.33□□□□□ -1.56
SOX2P48431 RN7SKP186-201ENST00000365371 303 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AC092634.1-201ENST00000366505 199 ntBASIC5.33□□□□□ -1.56
SOX2P48431 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX2P48431 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SOX2P48431 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SOX2P48431 MRPL32P1-201ENST00000406301 247 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.33□□□□□ -1.56
SOX2P48431 XKRYP4-201ENST00000414395 483 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.33□□□□□ -1.56
SOX2P48431 AC006509.1-201ENST00000420788 634 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SOX2P48431 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SOX2P48431 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 AL645939.3-201ENST00000435408 225 ntBASIC5.33□□□□□ -1.56
SOX2P48431 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SOX2P48431 PPIAP10-201ENST00000438675 458 ntBASIC5.33□□□□□ -1.56
SOX2P48431 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 AL591719.1-201ENST00000444669 744 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AL358794.1-201ENST00000445689 381 ntBASIC5.33□□□□□ -1.56
SOX2P48431 COX4I1P2-201ENST00000447446 547 ntBASIC5.33□□□□□ -1.56
SOX2P48431 XKRYP5-201ENST00000449659 483 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AL133480.2-201ENST00000456723 487 ntBASIC5.33□□□□□ -1.56
SOX2P48431 RPL5P13-201ENST00000462840 709 ntBASIC5.33□□□□□ -1.56
SOX2P48431 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX2P48431 RN7SL326P-201ENST00000477493 296 ntBASIC5.33□□□□□ -1.56
SOX2P48431 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX2P48431 TRBV5-2-201ENST00000489095 273 ntBASIC5.33□□□□□ -1.56
SOX2P48431 GM2AP2-201ENST00000491764 562 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AC010627.1-201ENST00000503819 1294 ntBASIC5.33□□□□□ -1.56
SOX2P48431 SNX18P24-201ENST00000505249 671 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX2P48431 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.33□□□□□ -1.56
SOX2P48431 IGKV2-19-201ENST00000518132 283 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX2P48431 AP001858.2-201ENST00000536213 601 ntBASIC5.33□□□□□ -1.56
SOX2P48431 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.33□□□□□ -1.56
SOX2P48431 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX2P48431 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX2P48431 AC016839.1-201ENST00000578162 867 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX2P48431 RPL7AP69-201ENST00000595306 806 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AC023206.1-201ENST00000605824 298 ntBASIC5.33□□□□□ -1.56
SOX2P48431 RNU4-5P-201ENST00000607255 135 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AC093388.1-201ENST00000609166 430 ntBASIC5.33□□□□□ -1.56
SOX2P48431 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 RN7SL261P-201ENST00000613441 282 ntBASIC5.33□□□□□ -1.56
SOX2P48431 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.33□□□□□ -1.56
SOX2P48431 RMST_10.1-201ENST00000616309 154 ntBASIC5.33□□□□□ -1.56
SOX2P48431 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.33□□□□□ -1.56
SOX2P48431 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.33□□□□□ -1.56
SOX2P48431 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.33□□□□□ -1.56
SOX2P48431 AC138907.8-201ENST00000623981 2256 ntBASIC5.33□□□□□ -1.56
SOX2P48431 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SOX2P48431 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SOX2P48431 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX2P48431 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.33□□□□□ -1.56
SOX2P48431 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX2P48431 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SOX2P48431 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
SOX2P48431 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 AC092111.2-201ENST00000611627 1414 ntBASIC5.32□□□□□ -1.56
SOX2P48431 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SOX2P48431 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX2P48431 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms