Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.95□□□□□ -1.46
HADHAP40939 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.95□□□□□ -1.46
HADHAP40939 SCARNA18.1-201ENST00000516330 83 ntBASIC5.95□□□□□ -1.46
HADHAP40939 AC078899.1-201ENST00000521432 1185 ntBASIC5.95□□□□□ -1.46
HADHAP40939 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.95□□□□□ -1.46
HADHAP40939 AC087272.1-201ENST00000523624 533 ntBASIC5.95□□□□□ -1.46
HADHAP40939 AP000859.1-201ENST00000525536 307 ntBASIC5.95□□□□□ -1.46
HADHAP40939 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HADHAP40939 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.95□□□□□ -1.46
HADHAP40939 AP005119.1-201ENST00000580956 292 ntBASIC5.95□□□□□ -1.46
HADHAP40939 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.95□□□□□ -1.46
HADHAP40939 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.95□□□□□ -1.46
HADHAP40939 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.95□□□□□ -1.46
HADHAP40939 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.95□□□□□ -1.46
HADHAP40939 AL138895.2-201ENST00000603019 178 ntBASIC5.95□□□□□ -1.46
HADHAP40939 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.95□□□□□ -1.46
HADHAP40939 AC015802.5-201ENST00000607478 399 ntBASIC5.95□□□□□ -1.46
HADHAP40939 AL133481.2-203ENST00000607558 139 ntBASIC5.95□□□□□ -1.46
HADHAP40939 AL159169.2-201ENST00000610061 1269 ntBASIC5.95□□□□□ -1.46
HADHAP40939 AL359742.1-201ENST00000622497 540 ntBASIC5.95□□□□□ -1.46
HADHAP40939 AC093671.1-201ENST00000624981 2929 ntBASIC5.95□□□□□ -1.46
HADHAP40939 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.95□□□□□ -1.46
HADHAP40939 AC099654.6-201ENST00000636487 512 ntBASIC5.95□□□□□ -1.46
HADHAP40939 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HADHAP40939 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HADHAP40939 AC016745.2-201ENST00000608834 3443 ntBASIC5.95□□□□□ -1.46
HADHAP40939 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.95□□□□□ -1.46
HADHAP40939 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
HADHAP40939 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HADHAP40939 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.95□□□□□ -1.46
HADHAP40939 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HADHAP40939 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.94□□□□□ -1.46
HADHAP40939 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
HADHAP40939 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.94□□□□□ -1.46
HADHAP40939 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HADHAP40939 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 SNORD65-201ENST00000391079 73 ntBASIC5.94□□□□□ -1.46
HADHAP40939 AC004386.1-201ENST00000393214 761 ntBASIC5.94□□□□□ -1.46
HADHAP40939 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.94□□□□□ -1.46
HADHAP40939 GAPDHP15-201ENST00000398586 975 ntBASIC5.94□□□□□ -1.46
HADHAP40939 AC016739.1-201ENST00000405359 345 ntBASIC5.94□□□□□ -1.46
HADHAP40939 RN7SKP279-201ENST00000411383 298 ntBASIC5.94□□□□□ -1.46
HADHAP40939 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.94□□□□□ -1.46
HADHAP40939 RPL35AP3-201ENST00000414680 288 ntBASIC5.94□□□□□ -1.46
HADHAP40939 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 CRIP1P1-201ENST00000427567 185 ntBASIC5.94□□□□□ -1.46
HADHAP40939 AL663074.2-201ENST00000440621 479 ntBASIC5.94□□□□□ -1.46
HADHAP40939 ATP5LP2-201ENST00000440646 311 ntBASIC5.94□□□□□ -1.46
HADHAP40939 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 BMS1P10-201ENST00000443754 1120 ntBASIC5.94□□□□□ -1.46
HADHAP40939 FRG2FP-204ENST00000453982 852 ntBASIC5.94□□□□□ -1.46
HADHAP40939 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.94□□□□□ -1.46
HADHAP40939 OR11I1P-201ENST00000486033 954 ntBASIC5.94□□□□□ -1.46
HADHAP40939 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.94□□□□□ -1.46
HADHAP40939 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.94□□□□□ -1.46
HADHAP40939 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.94□□□□□ -1.46
HADHAP40939 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.94□□□□□ -1.46
HADHAP40939 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.94□□□□□ -1.46
HADHAP40939 AC090424.1-201ENST00000535243 736 ntBASIC5.94□□□□□ -1.46
HADHAP40939 AC007956.1-201ENST00000555623 542 ntBASIC5.94□□□□□ -1.46
HADHAP40939 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.94□□□□□ -1.46
HADHAP40939 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.94□□□□□ -1.46
HADHAP40939 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 ZNF322P1-201ENST00000568013 1209 ntBASIC5.94□□□□□ -1.46
HADHAP40939 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.94□□□□□ -1.46
HADHAP40939 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.94□□□□□ -1.46
HADHAP40939 AL365181.4-201ENST00000609800 547 ntBASIC5.94□□□□□ -1.46
HADHAP40939 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.94□□□□□ -1.46
HADHAP40939 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.94□□□□□ -1.46
HADHAP40939 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.94□□□□□ -1.46
HADHAP40939 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.94□□□□□ -1.46
HADHAP40939 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HADHAP40939 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.94□□□□□ -1.46
HADHAP40939 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
HADHAP40939 AL359955.1-201ENST00000455242 3275 ntBASIC5.93□□□□□ -1.46
HADHAP40939 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HADHAP40939 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.93□□□□□ -1.46
HADHAP40939 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HADHAP40939 AC010132.2-201ENST00000295493 1043 ntBASIC5.93□□□□□ -1.46
HADHAP40939 U3.10-201ENST00000364459 214 ntBASIC5.93□□□□□ -1.46
HADHAP40939 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HADHAP40939 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.93□□□□□ -1.46
HADHAP40939 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HADHAP40939 RNU6-152P-201ENST00000384037 107 ntBASIC5.93□□□□□ -1.46
HADHAP40939 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HADHAP40939 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.93□□□□□ -1.46
HADHAP40939 EEF1B2P8-201ENST00000414101 671 ntBASIC5.93□□□□□ -1.46
HADHAP40939 AL354868.1-201ENST00000417077 482 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms