Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.4□□□□□ -1.38
COL4A5P29400 ATP5J2P6-201ENST00000565203 266 ntBASIC6.4□□□□□ -1.38
COL4A5P29400 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.4□□□□□ -1.38
COL4A5P29400 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.4□□□□□ -1.38
COL4A5P29400 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COL4A5P29400 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
COL4A5P29400 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A5P29400 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
COL4A5P29400 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL4A5P29400 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.4□□□□□ -1.39
COL4A5P29400 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL4A5P29400 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL4A5P29400 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
COL4A5P29400 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL4A5P29400 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL4A5P29400 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.39
COL4A5P29400 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.4□□□□□ -1.39
COL4A5P29400 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
COL4A5P29400 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A5P29400 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL4A5P29400 MIR1182-201ENST00000408363 97 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 TPT1P12-201ENST00000448968 492 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 RN7SL385P-201ENST00000468873 276 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 RN7SL354P-201ENST00000469282 294 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 PDCL3P4-201ENST00000489621 720 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
COL4A5P29400 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A5P29400 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.39□□□□□ -1.39
COL4A5P29400 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A5P29400 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A5P29400 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A5P29400 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A5P29400 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.39□□□□□ -1.39
COL4A5P29400 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.39□□□□□ -1.39
COL4A5P29400 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC6.39□□□□□ -1.39
COL4A5P29400 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A5P29400 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COL4A5P29400 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.39□□□□□ -1.39
COL4A5P29400 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
COL4A5P29400 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A5P29400 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.39□□□□□ -1.39
COL4A5P29400 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A5P29400 AC083899.1-201ENST00000454465 3819 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A5P29400 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A5P29400 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COL4A5P29400 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.39□□□□□ -1.39
COL4A5P29400 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A5P29400 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.39□□□□□ -1.39
COL4A5P29400 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
COL4A5P29400 RPL10P10-201ENST00000403509 664 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A5P29400 RPL5P25-201ENST00000441148 775 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 AC063943.1-201ENST00000465434 453 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 AP006289.1-201ENST00000538089 277 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 AC122688.1-201ENST00000541494 223 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.39□□□□□ -1.39
COL4A5P29400 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A5P29400 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.39□□□□□ -1.39
COL4A5P29400 MIR6780A-201ENST00000615089 68 ntBASIC6.39□□□□□ -1.39
COL4A5P29400 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL4A5P29400 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A5P29400 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.38□□□□□ -1.39
COL4A5P29400 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A5P29400 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL4A5P29400 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL4A5P29400 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.38□□□□□ -1.39
COL4A5P29400 SNORD1C-201ENST00000363315 78 ntBASIC6.38□□□□□ -1.39
COL4A5P29400 RNF10P1-201ENST00000418589 369 ntBASIC6.38□□□□□ -1.39
COL4A5P29400 AC092570.3-201ENST00000420113 693 ntBASIC6.38□□□□□ -1.39
COL4A5P29400 COX6CP17-201ENST00000421389 185 ntBASIC6.38□□□□□ -1.39
COL4A5P29400 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.38□□□□□ -1.39
COL4A5P29400 RPL12P17-201ENST00000432393 498 ntBASIC6.38□□□□□ -1.39
COL4A5P29400 AC093414.1-201ENST00000434712 514 ntBASIC6.38□□□□□ -1.39
COL4A5P29400 KNOP1P3-201ENST00000446933 426 ntBASIC6.38□□□□□ -1.39
COL4A5P29400 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL4A5P29400 AC096754.1-201ENST00000508904 818 ntBASIC6.38□□□□□ -1.39
COL4A5P29400 HPRT1P1-201ENST00000509498 657 ntBASIC6.38□□□□□ -1.39
COL4A5P29400 snoU109.5-201ENST00000516231 132 ntBASIC6.38□□□□□ -1.39
COL4A5P29400 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A5P29400 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL4A5P29400 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A5P29400 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.38□□□□□ -1.39
COL4A5P29400 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.38□□□□□ -1.39
COL4A5P29400 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL4A5P29400 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.38□□□□□ -1.39
COL4A5P29400 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.38□□□□□ -1.39
COL4A5P29400 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.38□□□□□ -1.39
COL4A5P29400 OR4F13P-202ENST00000560066 2054 ntBASIC6.38□□□□□ -1.39
COL4A5P29400 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL4A5P29400 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL4A5P29400 AL356317.1-201ENST00000396110 1436 ntBASIC6.37□□□□□ -1.39
COL4A5P29400 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL4A5P29400 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.37□□□□□ -1.39
COL4A5P29400 HSPD1P8-201ENST00000400121 1658 ntBASIC6.37□□□□□ -1.39
COL4A5P29400 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.37□□□□□ -1.39
COL4A5P29400 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.37□□□□□ -1.39
COL4A5P29400 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms