Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 MTCO3P43-201ENST00000440974 771 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 YRDCP3-201ENST00000456507 480 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 RNU1-88P-201ENST00000459274 128 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC023194.2-201ENST00000465398 406 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC104339.1-201ENST00000465478 348 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 RBBP4P1-201ENST00000502424 1276 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 PRMT5P1-201ENST00000514351 598 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC034244.2-201ENST00000514668 858 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC097486.1-201ENST00000515331 210 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC084121.1-201ENST00000533882 835 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC087888.1-201ENST00000550884 1254 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AL845552.1-201ENST00000556820 323 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC122134.1-201ENST00000565664 1104 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 MIR3154-201ENST00000577829 84 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AL136131.3-201ENST00000607600 188 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AL135786.2-201ENST00000608422 615 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AL139099.4-201ENST00000614802 114 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC245014.3-201ENST00000618589 347 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AL356490.1-201ENST00000623079 479 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 AL683826.1-201ENST00000624104 627 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 CASC19-274ENST00000642018 970 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AL158152.1-201ENST00000602652 1435 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 VPS35P1-201ENST00000563400 1518 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC024341.1-201ENST00000526444 1552 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AF287957.1-201ENST00000607368 1595 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 RNA5SP453-201ENST00000362503 119 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC016739.1-201ENST00000405359 345 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 RN7SKP279-201ENST00000411383 298 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 BX276092.6-201ENST00000430476 250 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 DEFA9P-201ENST00000433042 285 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 FTLP19-201ENST00000433300 394 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 GAPDHP48-201ENST00000436626 961 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC015983.1-201ENST00000441577 373 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 BX276092.8-201ENST00000455722 250 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC009963.3-201ENST00000458090 486 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 SNRPCP3-201ENST00000474888 476 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms