Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GCSHP4-201ENST00000538792 439 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 AC007224.1-201ENST00000564410 144 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 AC024255.1-201ENST00000614376 102 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 AC097063.1-201ENST00000426714 1797 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 PRNCR1-201ENST00000635449 12727 ntBASIC5.18□□□□□ -1.58
CHD8Q9HCK8 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD8Q9HCK8 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AL590004.4-201ENST00000566733 7060 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 MIR130A-201ENST00000385274 89 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 BOLA3P4-201ENST00000418151 400 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC092647.2-201ENST00000452998 253 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 HMGB1P44-201ENST00000508597 572 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 RN7SL690P-201ENST00000582087 240 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC011487.3-201ENST00000593607 453 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC073575.2-201ENST00000614212 627 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC006133.1-201ENST00000617106 264 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC130365.1-201ENST00000530524 1553 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 RNU1-149P-201ENST00000390870 161 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC069213.2-201ENST00000420238 366 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC009127.1-201ENST00000467090 155 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC091042.1-201ENST00000579213 173 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC069366.1-201ENST00000583159 838 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AL512782.1-201ENST00000603093 364 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AL160281.1-201ENST00000605307 311 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 AC104964.3-201ENST00000606115 2860 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 MAPK10-365ENST00000641902 3825 ntBASIC5.17□□□□□ -1.58
CHD8Q9HCK8 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD8Q9HCK8 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 RNA5SP332-201ENST00000391063 115 ntBASIC5.16□□□□□ -1.58
CHD8Q9HCK8 RPL10P10-201ENST00000403509 664 ntBASIC5.16□□□□□ -1.58
CHD8Q9HCK8 RPS3AP38-201ENST00000435889 763 ntBASIC5.16□□□□□ -1.58
CHD8Q9HCK8 RPL5P25-201ENST00000441148 775 ntBASIC5.16□□□□□ -1.58
CHD8Q9HCK8 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 RNA5SP400-201ENST00000517155 111 ntBASIC5.16□□□□□ -1.58
CHD8Q9HCK8 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 RPL12P25-202ENST00000598100 674 ntBASIC5.16□□□□□ -1.58
CHD8Q9HCK8 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.16□□□□□ -1.58
CHD8Q9HCK8 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms