Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL137072.1-201ENST00000603444 466 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC091488.1-201ENST00000604239 660 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AL607023.1-201ENST00000620045 248 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC116563.2-201ENST00000624751 535 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 TSHZ2-205ENST00000626626 670 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC138915.4-201ENST00000565549 4147 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC092162.3-201ENST00000624511 1624 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AL353743.4-201ENST00000422653 1547 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AL512646.1-201ENST00000269395 1077 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 RNU6-931P-201ENST00000363850 107 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 RNU6-553P-201ENST00000364047 96 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 MIR217-201ENST00000384817 110 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC008171.1-201ENST00000395058 200 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 ARSFP1-201ENST00000398758 477 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 RPS15AP38-201ENST00000413110 372 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AL022400.1-201ENST00000423946 935 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AL035407.1-201ENST00000429211 571 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 BX119917.1-201ENST00000432517 502 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 MTCO3P5-201ENST00000433620 714 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC098826.1-201ENST00000433943 471 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 MTCO2P7-201ENST00000446518 666 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 RPL7P59-201ENST00000447700 943 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC010307.1-201ENST00000467206 836 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 RN7SL836P-201ENST00000476140 296 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 RPS27P23-201ENST00000487608 251 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AP005202.1-201ENST00000489915 867 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 PGAM4P2-201ENST00000512491 721 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 MRPS5P3-201ENST00000515577 166 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 SCARNA6-201ENST00000515982 265 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 snoU109.6-201ENST00000516831 118 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 HIGD1AP6-201ENST00000521833 279 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 BCAS2P1-201ENST00000528022 632 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AC004217.3-201ENST00000551552 878 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 DPRXP4-201ENST00000578053 568 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 MIR4428-201ENST00000584884 73 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AL139418.1-201ENST00000613613 177 ntBASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.73□□□□□ -1.17
TRAIPQ9BWF2 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 AP000526.1-201ENST00000603308 1388 ntBASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.72□□□□□ -1.17
TRAIPQ9BWF2 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms