Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 AC016027.5-201ENST00000427227 210 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 AGGF1P7-201ENST00000562369 913 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 AC093227.2-201ENST00000589357 285 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 RNU4-39P-201ENST00000362455 127 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 RNU1-136P-201ENST00000384181 164 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 AL353626.3-201ENST00000413399 657 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 RPEP3-201ENST00000425462 676 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 AL451063.1-201ENST00000450164 1133 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 GTF2F2P1-201ENST00000511083 675 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 RN7SKP276-201ENST00000516242 268 ntBASIC4.3□□□□□ -1.72
VPS13CQ709C8 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
VPS13CQ709C8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS13CQ709C8 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 SNORA70.4-201ENST00000365509 134 ntBASIC4.29□□□□□ -1.72
VPS13CQ709C8 GAPDHP15-201ENST00000398586 975 ntBASIC4.29□□□□□ -1.72
VPS13CQ709C8 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 AL133481.2-203ENST00000607558 139 ntBASIC4.29□□□□□ -1.72
VPS13CQ709C8 MIR92B-201ENST00000607575 96 ntBASIC4.29□□□□□ -1.72
VPS13CQ709C8 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 NPM1P33-201ENST00000438918 872 ntBASIC4.29□□□□□ -1.72
VPS13CQ709C8 AC109464.1-201ENST00000511091 819 ntBASIC4.29□□□□□ -1.72
VPS13CQ709C8 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 RPL21P108-201ENST00000413857 481 ntBASIC4.29□□□□□ -1.72
VPS13CQ709C8 TXNP5-201ENST00000441043 315 ntBASIC4.29□□□□□ -1.72
VPS13CQ709C8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 AP003400.3-201ENST00000624904 346 ntBASIC4.29□□□□□ -1.72
VPS13CQ709C8 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 AL355834.1-201ENST00000556602 3965 ntBASIC4.29□□□□□ -1.72
VPS13CQ709C8 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS13CQ709C8 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS13CQ709C8 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS13CQ709C8 ZNF840P-201ENST00000504759 1996 ntBASIC4.28□□□□□ -1.72
VPS13CQ709C8 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms