Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC104083.1-201ENST00000569449 2615 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 OR9G4-201ENST00000302957 984 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 RNU1-24P-201ENST00000364285 165 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 SNORD65C-201ENST00000390962 71 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC092952.1-201ENST00000397646 1209 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 RN7SKP207-201ENST00000411204 303 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC027644.1-201ENST00000419595 298 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC093107.1-201ENST00000422772 609 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 GAPDHP55-201ENST00000423136 803 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC009299.1-201ENST00000429684 717 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 RPSAP62-201ENST00000432596 833 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC231532.1-201ENST00000438584 312 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 TRIM60P16-201ENST00000444048 694 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC234771.3-201ENST00000454984 622 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 FTH1P23-201ENST00000492727 550 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC021678.1-201ENST00000505195 936 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC010587.2-201ENST00000511727 448 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC117383.2-201ENST00000514722 322 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 RNA5SP75-201ENST00000516841 111 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 DPPA3P2-201ENST00000553589 478 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC090515.3-201ENST00000560431 315 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 RPS3AP23-202ENST00000574601 686 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 MIR548AB-201ENST00000584917 84 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC103881.1-201ENST00000603476 538 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 FXYD6P1-201ENST00000604857 285 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC008536.2-201ENST00000607284 349 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AL050343.2-201ENST00000607338 280 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC087893.2-201ENST00000623272 255 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AF001550.2-201ENST00000636643 217 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 LINC01739-205ENST00000641890 573 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 PSG10P-201ENST00000501199 1500 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 Z99496.1-201ENST00000469424 1477 ntBASIC7.62□□□□□ -1.19
FOXR1Q6PIV2 AP000547.3-204ENST00000588548 2523 ntBASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 FRG1BP-201ENST00000278882 761 ntBASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 FRG1CP-201ENST00000358464 769 ntBASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 RNU5A-6P-201ENST00000384136 116 ntBASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 KRT18P52-201ENST00000404956 846 ntBASIC7.61□□□□□ -1.19
FOXR1Q6PIV2 RNU2-17P-201ENST00000410290 190 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms