Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 OR7E99P-201ENST00000505750 922 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 RNU6-1004P-201ENST00000516584 111 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 IGKV3D-34-201ENST00000522638 302 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 NPM1P35-201ENST00000533043 868 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 NANOGNBP2-201ENST00000544753 553 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC011611.5-201ENST00000552477 578 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 TPRX1P1-201ENST00000557620 319 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC112220.2-201ENST00000605513 533 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC011374.2-201ENST00000607135 526 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC011472.4-201ENST00000615848 491 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC015660.5-201ENST00000623238 564 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC010624.4-201ENST00000597606 1351 ntBASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC144BQ3MJ40 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC140479.2-201ENST00000421567 3130 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 RN7SKP78-201ENST00000364711 318 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 LCN1P2-201ENST00000372030 223 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AL034374.1-201ENST00000406329 351 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 LINC01347-201ENST00000417964 355 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC023128.2-201ENST00000420880 1223 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 Z68868.1-201ENST00000429048 544 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC242426.1-201ENST00000435270 960 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 RAB28P2-201ENST00000454299 641 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC022415.1-202ENST00000486612 523 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 IGLVIV-64-201ENST00000518581 301 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 COX6B1P4-201ENST00000519826 484 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 CYCSP38-201ENST00000559840 322 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 MIR4701-201ENST00000583094 63 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AP002906.1-201ENST00000603405 233 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AL080312.2-201ENST00000613001 630 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AP001264.1-201ENST00000620602 703 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC026124.2-201ENST00000621847 656 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 SNX18P12-201ENST00000624821 759 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AL353743.3-201ENST00000442109 1468 ntBASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC144BQ3MJ40 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.27□□□□□ -1.24
CCDC144BQ3MJ40 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
CCDC144BQ3MJ40 MAPK10-261ENST00000641050 3109 ntBASIC7.27□□□□□ -1.24
CCDC144BQ3MJ40 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.27□□□□□ -1.24
CCDC144BQ3MJ40 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.27□□□□□ -1.24
CCDC144BQ3MJ40 AC093225.1-201ENST00000506867 1408 ntBASIC7.27□□□□□ -1.24
CCDC144BQ3MJ40 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC144BQ3MJ40 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms