Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL356274.1-201ENST00000617064 410 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AL445493.3-201ENST00000619568 477 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 AP001052.1-201ENST00000626421 99 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AC010325.3-201ENST00000641084 394 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.79□□□□□ -1.48
NR1H2P55055 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.79□□□□□ -1.48
NR1H2P55055 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
NR1H2P55055 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NR1H2P55055 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.79□□□□□ -1.48
NR1H2P55055 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.79□□□□□ -1.48
NR1H2P55055 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.79□□□□□ -1.48
NR1H2P55055 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NR1H2P55055 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NR1H2P55055 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NR1H2P55055 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NR1H2P55055 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NR1H2P55055 PPIAP24-201ENST00000328558 471 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 RN7SKP69-201ENST00000365390 305 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.78□□□□□ -1.48
NR1H2P55055 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NR1H2P55055 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.78□□□□□ -1.48
NR1H2P55055 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NR1H2P55055 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NR1H2P55055 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.78□□□□□ -1.48
NR1H2P55055 MGAT2P2-201ENST00000427194 797 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 AL354707.3-201ENST00000427308 331 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 MTND2P40-201ENST00000436718 841 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 EIF5AP4-201ENST00000441206 465 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 RPSAP40-201ENST00000442343 891 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 RPS10P18-201ENST00000442662 495 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.78□□□□□ -1.48
NR1H2P55055 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.78□□□□□ -1.48
NR1H2P55055 AC021006.1-201ENST00000489849 553 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 AC113367.2-201ENST00000505749 160 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 AC106800.3-201ENST00000511389 308 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.78□□□□□ -1.48
NR1H2P55055 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.78□□□□□ -1.48
NR1H2P55055 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.78□□□□□ -1.48
NR1H2P55055 OR4A43P-201ENST00000532938 908 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.78□□□□□ -1.48
NR1H2P55055 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.78□□□□□ -1.48
NR1H2P55055 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.78□□□□□ -1.48
NR1H2P55055 AC125612.1-201ENST00000547580 377 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 CR383656.14-201ENST00000551951 406 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.78□□□□□ -1.48
NR1H2P55055 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.78□□□□□ -1.48
NR1H2P55055 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.78□□□□□ -1.48
NR1H2P55055 NDUFA5P11-201ENST00000567995 343 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.78□□□□□ -1.48
NR1H2P55055 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.78□□□□□ -1.48
NR1H2P55055 CBX3P2-202ENST00000583365 535 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 MIR132-201ENST00000591554 101 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 AC010503.3-201ENST00000594355 540 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.78□□□□□ -1.48
NR1H2P55055 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.78□□□□□ -1.48
NR1H2P55055 AC090617.9-201ENST00000623751 147 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 AC145207.9-201ENST00000623802 325 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.78□□□□□ -1.48
NR1H2P55055 AC119674.1-212ENST00000641155 993 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NR1H2P55055 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.78□□□□□ -1.48
NR1H2P55055 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NR1H2P55055 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.78□□□□□ -1.48
NR1H2P55055 AP001284.1-201ENST00000528393 2118 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
NR1H2P55055 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NR1H2P55055 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.78□□□□□ -1.48
NR1H2P55055 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NR1H2P55055 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NR1H2P55055 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.78□□□□□ -1.48
NR1H2P55055 LINC01613-201ENST00000561476 2780 ntBASIC5.78□□□□□ -1.48
NR1H2P55055 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
NR1H2P55055 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NR1H2P55055 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NR1H2P55055 CASC19-284ENST00000642142 1868 ntBASIC5.77□□□□□ -1.49
NR1H2P55055 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.77□□□□□ -1.49
NR1H2P55055 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NR1H2P55055 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NR1H2P55055 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.77□□□□□ -1.49
NR1H2P55055 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NR1H2P55055 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NR1H2P55055 MRPS6P2-201ENST00000381143 370 ntBASIC5.77□□□□□ -1.49
NR1H2P55055 RNA5SP498-201ENST00000411342 120 ntBASIC5.77□□□□□ -1.49
NR1H2P55055 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NR1H2P55055 AC138761.5-201ENST00000433967 325 ntBASIC5.77□□□□□ -1.49
NR1H2P55055 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.77□□□□□ -1.49
NR1H2P55055 ELOCP3-201ENST00000439303 348 ntBASIC5.77□□□□□ -1.49
NR1H2P55055 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.77□□□□□ -1.49
NR1H2P55055 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.77□□□□□ -1.49
NR1H2P55055 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.77□□□□□ -1.49
NR1H2P55055 RPL23AP23-201ENST00000452590 471 ntBASIC5.77□□□□□ -1.49
NR1H2P55055 MTND2P6-201ENST00000455337 1030 ntBASIC5.77□□□□□ -1.49
NR1H2P55055 AL133244.1-201ENST00000456007 258 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 366.6 ms