Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.11□□□□□ -1.75
LITAFQ99732 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
LITAFQ99732 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LITAFQ99732 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LITAFQ99732 OR56A4-201ENST00000330728 1209 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LITAFQ99732 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LITAFQ99732 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 SNORD116-8-201ENST00000384365 95 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 SNORD116-12-201ENST00000384468 92 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 RNU6-636P-201ENST00000384598 107 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LITAFQ99732 RNU6-932P-201ENST00000391108 106 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 LDHAP5-201ENST00000394996 622 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
LITAFQ99732 AL590635.1-201ENST00000406314 586 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.11□□□□□ -1.75
LITAFQ99732 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 HMGB1P49-201ENST00000418882 569 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 RPS3AP37-201ENST00000419176 745 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AC023128.2-201ENST00000420880 1223 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 RPSAP59-201ENST00000421048 890 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AL513175.2-201ENST00000422071 443 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AL139184.1-202ENST00000422303 222 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 OR5M12P-201ENST00000423388 929 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 Z84478.1-201ENST00000438230 1219 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AC009518.3-201ENST00000438972 253 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 SEPT14P24-201ENST00000447236 180 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 RPL7P45-201ENST00000455851 743 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 GTF2IP12-201ENST00000456547 356 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.11□□□□□ -1.75
LITAFQ99732 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 RPS2P25-201ENST00000467247 580 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AL157777.1-201ENST00000468100 304 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 AC107398.1-201ENST00000486904 505 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AC079203.1-201ENST00000487972 404 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 AC095052.1-201ENST00000509955 863 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 Y_RNA.688-201ENST00000516565 95 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 MTCYBP19-201ENST00000517463 1124 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 TPM3P3-201ENST00000521343 354 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AP004609.2-201ENST00000532177 190 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 AC011611.5-201ENST00000552477 578 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
LITAFQ99732 AC009094.1-201ENST00000564443 426 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC4.11□□□□□ -1.75
LITAFQ99732 RBM22P1-201ENST00000578589 1214 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 BOLA2P1-201ENST00000584794 232 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AC061975.8-201ENST00000587058 721 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AC090241.1-201ENST00000587732 621 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.11□□□□□ -1.75
LITAFQ99732 ZNF92P3-201ENST00000596594 954 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AC006115.2-201ENST00000596823 202 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 AL022394.1-201ENST00000606979 292 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 AC092106.3-201ENST00000611308 722 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.11□□□□□ -1.75
LITAFQ99732 AL355974.3-201ENST00000617383 467 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 MIR7159-201ENST00000620587 66 ntBASIC4.11□□□□□ -1.75
LITAFQ99732 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LITAFQ99732 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.11□□□□□ -1.75
LITAFQ99732 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms