Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AL157687.1-201ENST00000554853 619 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC073091.2-201ENST00000603205 907 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 U47924.1-201ENST00000606539 434 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC024560.3-201ENST00000608482 349 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 RN7SL680P-201ENST00000620379 299 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 OR4G1P-202ENST00000641173 1788 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC011379.1-201ENST00000508713 3025 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC069222.1-201ENST00000608028 3360 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 KYNUP1-201ENST00000466683 1406 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC061975.5-201ENST00000584928 1441 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 MFSD8-217ENST00000641178 4374 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 PTMAP8-201ENST00000397729 342 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 MTCYBP36-201ENST00000404146 440 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC009237.9-201ENST00000414800 347 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC092647.1-201ENST00000420654 287 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC108039.2-201ENST00000440214 359 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 RPL29P7-201ENST00000440227 457 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 HMGN1P32-201ENST00000441744 256 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC010240.2-201ENST00000445363 1205 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 HIST1H2APS6-201ENST00000448609 364 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 NDUFB4P1-201ENST00000462398 381 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC092757.1-201ENST00000467293 467 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC007537.2-201ENST00000472093 511 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 RPS3AP49-201ENST00000472161 790 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 RN7SL282P-201ENST00000479676 297 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 RN7SL153P-201ENST00000486501 292 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC095059.2-201ENST00000510601 933 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AP001893.2-201ENST00000526949 202 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC243312.1-201ENST00000570582 275 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AL161729.4-201ENST00000604650 476 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC069304.2-201ENST00000605154 435 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC116312.1-201ENST00000606841 314 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC015922.4-201ENST00000612568 690 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC117529.2-201ENST00000512159 2068 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC079097.1-201ENST00000512187 1399 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 SOCS5P5-201ENST00000402732 1586 ntBASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LYSMD3Q7Z3D4 AC010886.1-201ENST00000437380 2869 ntBASIC7.53□□□□□ -1.2
LYSMD3Q7Z3D4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LYSMD3Q7Z3D4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.53□□□□□ -1.2
LYSMD3Q7Z3D4 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.53□□□□□ -1.2
LYSMD3Q7Z3D4 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
LYSMD3Q7Z3D4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
LYSMD3Q7Z3D4 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
LYSMD3Q7Z3D4 AP000766.1-201ENST00000561746 4140 ntBASIC7.53□□□□□ -1.2
LYSMD3Q7Z3D4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LYSMD3Q7Z3D4 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LYSMD3Q7Z3D4 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms