Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A5P29400 AC073264.2-201ENST00000448886 166 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 AL513533.1-201ENST00000453728 415 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 SLC25A51P1-201ENST00000468432 871 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 AP000797.2-201ENST00000475768 606 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A5P29400 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.45□□□□□ -1.38
COL4A5P29400 GTF2F2P1-201ENST00000511083 675 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 AC109464.1-201ENST00000511091 819 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.45□□□□□ -1.38
COL4A5P29400 MEMO1P5-201ENST00000604810 406 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.45□□□□□ -1.38
COL4A5P29400 AC114774.1-201ENST00000507410 1770 ntBASIC6.45□□□□□ -1.38
COL4A5P29400 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.45□□□□□ -1.38
COL4A5P29400 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A5P29400 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A5P29400 AC018765.1-201ENST00000623357 3446 ntBASIC6.44□□□□□ -1.38
COL4A5P29400 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC6.44□□□□□ -1.38
COL4A5P29400 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
COL4A5P29400 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A5P29400 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A5P29400 TTC3P1-201ENST00000399586 6081 ntBASIC6.44□□□□□ -1.38
COL4A5P29400 ZNF969P-201ENST00000510345 2341 ntBASIC6.44□□□□□ -1.38
COL4A5P29400 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.44□□□□□ -1.38
COL4A5P29400 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A5P29400 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A5P29400 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A5P29400 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.44□□□□□ -1.38
COL4A5P29400 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.44□□□□□ -1.38
COL4A5P29400 AC073072.2-201ENST00000447425 348 ntBASIC6.44□□□□□ -1.38
COL4A5P29400 STRADBP1-201ENST00000478954 1281 ntBASIC6.44□□□□□ -1.38
COL4A5P29400 RN7SL423P-201ENST00000486202 304 ntBASIC6.44□□□□□ -1.38
COL4A5P29400 AC021106.1-201ENST00000509020 1058 ntBASIC6.44□□□□□ -1.38
COL4A5P29400 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A5P29400 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A5P29400 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A5P29400 RN7SL356P-201ENST00000582228 248 ntBASIC6.44□□□□□ -1.38
COL4A5P29400 AP003789.1-201ENST00000617737 605 ntBASIC6.44□□□□□ -1.38
COL4A5P29400 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.44□□□□□ -1.38
COL4A5P29400 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A5P29400 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A5P29400 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A5P29400 AC009948.3-201ENST00000603415 1798 ntBASIC6.44□□□□□ -1.38
COL4A5P29400 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COL4A5P29400 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A5P29400 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A5P29400 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A5P29400 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COL4A5P29400 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
COL4A5P29400 RNU1-136P-201ENST00000384181 164 ntBASIC6.43□□□□□ -1.38
COL4A5P29400 GAPDHP15-201ENST00000398586 975 ntBASIC6.43□□□□□ -1.38
COL4A5P29400 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.43□□□□□ -1.38
COL4A5P29400 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.43□□□□□ -1.38
COL4A5P29400 AC092754.1-201ENST00000472975 479 ntBASIC6.43□□□□□ -1.38
COL4A5P29400 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.43□□□□□ -1.38
COL4A5P29400 GCSHP4-201ENST00000538792 439 ntBASIC6.43□□□□□ -1.38
COL4A5P29400 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.43□□□□□ -1.38
COL4A5P29400 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.43□□□□□ -1.38
COL4A5P29400 MIR4301-201ENST00000577203 66 ntBASIC6.43□□□□□ -1.38
COL4A5P29400 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL4A5P29400 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.43□□□□□ -1.38
COL4A5P29400 AC009237.13-201ENST00000603193 276 ntBASIC6.43□□□□□ -1.38
COL4A5P29400 AC009597.2-201ENST00000604659 592 ntBASIC6.43□□□□□ -1.38
COL4A5P29400 AL133481.2-203ENST00000607558 139 ntBASIC6.43□□□□□ -1.38
COL4A5P29400 AL161616.1-201ENST00000611867 286 ntBASIC6.43□□□□□ -1.38
COL4A5P29400 AC010435.1-201ENST00000623353 1177 ntBASIC6.43□□□□□ -1.38
COL4A5P29400 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.43□□□□□ -1.38
COL4A5P29400 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A5P29400 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A5P29400 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.43□□□□□ -1.38
COL4A5P29400 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A5P29400 AC007996.1-201ENST00000620414 2821 ntBASIC6.43□□□□□ -1.38
COL4A5P29400 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.43□□□□□ -1.38
COL4A5P29400 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COL4A5P29400 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A5P29400 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COL4A5P29400 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A5P29400 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL4A5P29400 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A5P29400 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.43□□□□□ -1.38
COL4A5P29400 AC007114.2-201ENST00000576014 4281 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.42□□□□□ -1.38
COL4A5P29400 FAM3C2-201ENST00000312214 681 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL4A5P29400 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.42□□□□□ -1.38
COL4A5P29400 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A5P29400 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A5P29400 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.42□□□□□ -1.38
COL4A5P29400 AL590399.4-201ENST00000436561 601 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL4A5P29400 RN7SKP98-201ENST00000517070 156 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.42□□□□□ -1.38
COL4A5P29400 MIR4270-201ENST00000581799 70 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 H3F3BP2-201ENST00000583907 357 ntBASIC6.42□□□□□ -1.38
COL4A5P29400 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms