Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC111152.1-202ENST00000635848 339 ntBASIC7.52□□□□□ -1.21
HOXD8P13378 AC127502.3-201ENST00000636170 1206 ntBASIC7.52□□□□□ -1.21
HOXD8P13378 AC099654.12-201ENST00000639868 649 ntBASIC7.52□□□□□ -1.21
HOXD8P13378 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.52□□□□□ -1.21
HOXD8P13378 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HOXD8P13378 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
HOXD8P13378 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
HOXD8P13378 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HOXD8P13378 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HOXD8P13378 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HOXD8P13378 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 UGT2B25P-201ENST00000511504 1586 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.51□□□□□ -1.21
HOXD8P13378 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HOXD8P13378 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 RNU6-253P-201ENST00000384730 105 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 BTF3P7-201ENST00000407097 488 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 CYCSP17-201ENST00000407870 315 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.51□□□□□ -1.21
HOXD8P13378 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 RPL7P8-201ENST00000411964 730 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 CYP4F32P-201ENST00000426492 504 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 KCTD9P1-201ENST00000430462 1167 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 VN1R54P-201ENST00000435210 1049 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC7.51□□□□□ -1.21
HOXD8P13378 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC7.51□□□□□ -1.21
HOXD8P13378 AC114755.5-201ENST00000447760 831 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.51□□□□□ -1.21
HOXD8P13378 KATNBL1P6-201ENST00000453433 915 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC7.51□□□□□ -1.21
HOXD8P13378 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.51□□□□□ -1.21
HOXD8P13378 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.51□□□□□ -1.21
HOXD8P13378 FCF1P3-201ENST00000496394 590 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 AC093664.1-201ENST00000511779 289 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 AC116347.2-201ENST00000514912 523 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AC106038.2-201ENST00000520706 568 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AP001317.1-201ENST00000531194 960 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC7.51□□□□□ -1.21
HOXD8P13378 ZNF519P3-201ENST00000557158 1032 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 MIR5708-201ENST00000579723 85 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 OR4G1P-201ENST00000588632 938 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.51□□□□□ -1.21
HOXD8P13378 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.51□□□□□ -1.21
HOXD8P13378 AL137072.1-201ENST00000603444 466 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AC119501.1-201ENST00000603646 475 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 AL645933.2-201ENST00000606743 1207 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 RMST_5.1-201ENST00000618704 126 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AC005840.5-201ENST00000619166 599 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AC010435.1-201ENST00000623353 1177 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 AC016717.3-201ENST00000624730 554 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.51□□□□□ -1.21
HOXD8P13378 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.51□□□□□ -1.21
HOXD8P13378 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HOXD8P13378 AC074141.1-201ENST00000588129 2995 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HOXD8P13378 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 AC132219.2-201ENST00000624416 2327 ntBASIC7.51□□□□□ -1.21
HOXD8P13378 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.51□□□□□ -1.21
HOXD8P13378 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HOXD8P13378 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.51□□□□□ -1.21
HOXD8P13378 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HOXD8P13378 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.5□□□□□ -1.21
HOXD8P13378 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
HOXD8P13378 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HOXD8P13378 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HOXD8P13378 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HOXD8P13378 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HOXD8P13378 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
HOXD8P13378 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HOXD8P13378 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
HOXD8P13378 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HOXD8P13378 PDZK1P1-202ENST00000425209 1350 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms