Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXC8P31273 AC000068.2-201ENST00000608816 460 ntBASIC6.22□□□□□ -1.41
HOXC8P31273 AC118658.2-201ENST00000618697 459 ntBASIC6.22□□□□□ -1.41
HOXC8P31273 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXC8P31273 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC8P31273 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXC8P31273 ZNF658B-201ENST00000602828 3408 ntBASIC6.22□□□□□ -1.41
HOXC8P31273 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXC8P31273 AC007342.5-201ENST00000571340 2142 ntBASIC6.22□□□□□ -1.41
HOXC8P31273 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXC8P31273 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXC8P31273 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.41
HOXC8P31273 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.21□□□□□ -1.41
HOXC8P31273 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
HOXC8P31273 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.21□□□□□ -1.41
HOXC8P31273 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
HOXC8P31273 AC012078.1-201ENST00000405035 1646 ntBASIC6.21□□□□□ -1.41
HOXC8P31273 AL034546.1-201ENST00000623740 3693 ntBASIC6.21□□□□□ -1.41
HOXC8P31273 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HOXC8P31273 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
HOXC8P31273 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
HOXC8P31273 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.21□□□□□ -1.41
HOXC8P31273 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HOXC8P31273 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.21□□□□□ -1.41
HOXC8P31273 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
HOXC8P31273 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 U3.2-201ENST00000362981 210 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 RNA5SP335-201ENST00000363817 110 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 RPS6P23-201ENST00000413224 722 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC8P31273 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC8P31273 NPM1P22-201ENST00000427761 952 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC8P31273 RPL7L1P9-201ENST00000431298 745 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC8P31273 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 OR52B5P-201ENST00000435337 951 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 RN7SL222P-201ENST00000476452 299 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 AC079841.1-201ENST00000481228 950 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 AC093270.2-201ENST00000486157 792 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
HOXC8P31273 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC8P31273 CDC42P3-201ENST00000518493 633 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 AC078899.1-201ENST00000521432 1185 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC8P31273 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC8P31273 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC8P31273 AC084033.1-201ENST00000550830 633 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 AL049779.2-201ENST00000553847 315 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC8P31273 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC8P31273 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 AC037198.3-201ENST00000616754 526 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 MIR6730-201ENST00000622213 67 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 AC021766.1-201ENST00000624404 741 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC8P31273 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC8P31273 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 OR52B5P-202ENST00000641118 1110 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HOXC8P31273 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC8P31273 CR382285.2-201ENST00000624662 1495 ntBASIC6.21□□□□□ -1.42
HOXC8P31273 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HOXC8P31273 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC8P31273 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HOXC8P31273 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXC8P31273 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.2□□□□□ -1.42
HOXC8P31273 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
HOXC8P31273 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 CBX1P3-201ENST00000413296 527 ntBASIC6.2□□□□□ -1.42
HOXC8P31273 VN1R21P-201ENST00000426703 765 ntBASIC6.2□□□□□ -1.42
HOXC8P31273 AL365220.1-201ENST00000432923 399 ntBASIC6.2□□□□□ -1.42
HOXC8P31273 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HOXC8P31273 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC8P31273 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC8P31273 RN7SL51P-201ENST00000468230 285 ntBASIC6.2□□□□□ -1.42
HOXC8P31273 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC8P31273 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC8P31273 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms