Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL139824.2-201ENST00000458731 1095 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 RN7SL39P-201ENST00000462264 297 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.79□□□□□ -1.48
SUMO3P55854 RN7SL369P-201ENST00000477138 299 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC068587.2-201ENST00000478386 781 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC005412.2-201ENST00000492004 341 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC021146.5-201ENST00000503544 545 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.79□□□□□ -1.48
SUMO3P55854 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.79□□□□□ -1.48
SUMO3P55854 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.79□□□□□ -1.48
SUMO3P55854 KHDC1P1-201ENST00000511053 508 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.79□□□□□ -1.48
SUMO3P55854 RN7SKP287-201ENST00000516546 266 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 OR10V3P-201ENST00000525712 725 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.79□□□□□ -1.48
SUMO3P55854 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.79□□□□□ -1.48
SUMO3P55854 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.79□□□□□ -1.48
SUMO3P55854 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.79□□□□□ -1.48
SUMO3P55854 AC008055.1-201ENST00000547032 609 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.79□□□□□ -1.48
SUMO3P55854 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.79□□□□□ -1.48
SUMO3P55854 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.79□□□□□ -1.48
SUMO3P55854 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.79□□□□□ -1.48
SUMO3P55854 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.79□□□□□ -1.48
SUMO3P55854 AL589863.1-201ENST00000595383 631 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC005479.3-201ENST00000602790 431 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.79□□□□□ -1.48
SUMO3P55854 AC096586.1-201ENST00000610267 561 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.79□□□□□ -1.48
SUMO3P55854 AC089999.3-201ENST00000622440 577 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC004232.3-201ENST00000622977 525 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC004836.1-201ENST00000623032 634 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC007603.3-201ENST00000636915 979 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AL596275.2-208ENST00000641192 594 ntBASIC5.79□□□□□ -1.48
SUMO3P55854 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.79□□□□□ -1.48
SUMO3P55854 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
SUMO3P55854 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.79□□□□□ -1.48
SUMO3P55854 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.79□□□□□ -1.48
SUMO3P55854 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.79□□□□□ -1.48
SUMO3P55854 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.79□□□□□ -1.48
SUMO3P55854 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SUMO3P55854 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.78□□□□□ -1.48
SUMO3P55854 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.78□□□□□ -1.48
SUMO3P55854 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SUMO3P55854 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SUMO3P55854 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.78□□□□□ -1.48
SUMO3P55854 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SUMO3P55854 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.78□□□□□ -1.48
SUMO3P55854 AP003170.5-201ENST00000397185 335 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 DNAJC19P6-201ENST00000401853 280 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AL136131.1-201ENST00000406079 803 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 RN7SKP146-201ENST00000410242 334 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.78□□□□□ -1.48
SUMO3P55854 NME1P1-201ENST00000420914 382 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 VN2R3P-201ENST00000422626 1412 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.78□□□□□ -1.48
SUMO3P55854 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.78□□□□□ -1.48
SUMO3P55854 RLIMP2-201ENST00000427891 1563 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.78□□□□□ -1.48
SUMO3P55854 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.78□□□□□ -1.48
SUMO3P55854 CACYBPP1-201ENST00000438592 684 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.78□□□□□ -1.48
SUMO3P55854 OR10R1P-201ENST00000441524 1141 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 POU5F1P5-201ENST00000445059 658 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AC234771.2-201ENST00000445718 597 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 OR51B8P-201ENST00000449892 769 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.78□□□□□ -1.48
SUMO3P55854 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.78□□□□□ -1.48
SUMO3P55854 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 AL035407.2-201ENST00000454090 378 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 RN7SL326P-201ENST00000477493 296 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AC037198.2-201ENST00000478845 733 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.78□□□□□ -1.48
SUMO3P55854 PRELID3BP5-201ENST00000508612 460 ntBASIC5.78□□□□□ -1.48
SUMO3P55854 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SUMO3P55854 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.78□□□□□ -1.48
SUMO3P55854 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.78□□□□□ -1.48
SUMO3P55854 OR8I1P-201ENST00000529291 931 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms