Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 BNIP3P27-201ENST00000599991 412 ntBASIC6.38□□□□□ -1.39
NEK3P51956 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.38□□□□□ -1.39
NEK3P51956 AC005034.4-201ENST00000603612 899 ntBASIC6.38□□□□□ -1.39
NEK3P51956 AC009237.12-201ENST00000604755 742 ntBASIC6.38□□□□□ -1.39
NEK3P51956 AC025175.1-201ENST00000606482 759 ntBASIC6.38□□□□□ -1.39
NEK3P51956 AC110792.4-201ENST00000609843 298 ntBASIC6.38□□□□□ -1.39
NEK3P51956 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
NEK3P51956 MIR6071-201ENST00000616741 78 ntBASIC6.38□□□□□ -1.39
NEK3P51956 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.38□□□□□ -1.39
NEK3P51956 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
NEK3P51956 MTND5P11-201ENST00000511037 1812 ntBASIC6.38□□□□□ -1.39
NEK3P51956 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 AL359976.1-201ENST00000418655 3528 ntBASIC6.38□□□□□ -1.39
NEK3P51956 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.38□□□□□ -1.39
NEK3P51956 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.37□□□□□ -1.39
NEK3P51956 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 MTCO1P15-201ENST00000529569 1526 ntBASIC6.37□□□□□ -1.39
NEK3P51956 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.37□□□□□ -1.39
NEK3P51956 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NEK3P51956 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NEK3P51956 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NEK3P51956 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 RPL23AP17-201ENST00000401064 499 ntBASIC6.37□□□□□ -1.39
NEK3P51956 GCNT1P4-201ENST00000404096 329 ntBASIC6.37□□□□□ -1.39
NEK3P51956 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.37□□□□□ -1.39
NEK3P51956 RNA5SP498-201ENST00000411342 120 ntBASIC6.37□□□□□ -1.39
NEK3P51956 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
NEK3P51956 NIFKP3-201ENST00000417799 865 ntBASIC6.37□□□□□ -1.39
NEK3P51956 AC015977.1-201ENST00000418887 292 ntBASIC6.37□□□□□ -1.39
NEK3P51956 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.37□□□□□ -1.39
NEK3P51956 PSMD10P2-201ENST00000432890 672 ntBASIC6.37□□□□□ -1.39
NEK3P51956 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.37□□□□□ -1.39
NEK3P51956 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.37□□□□□ -1.39
NEK3P51956 PSMC1P13-201ENST00000458195 985 ntBASIC6.37□□□□□ -1.39
NEK3P51956 SETP6-201ENST00000479329 568 ntBASIC6.37□□□□□ -1.39
NEK3P51956 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.37□□□□□ -1.39
NEK3P51956 PPP1R11P1-201ENST00000486095 376 ntBASIC6.37□□□□□ -1.39
NEK3P51956 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.37□□□□□ -1.39
NEK3P51956 AL035690.1-201ENST00000490892 383 ntBASIC6.37□□□□□ -1.39
NEK3P51956 PFN1P8-201ENST00000497012 543 ntBASIC6.37□□□□□ -1.39
NEK3P51956 CDH12P2-201ENST00000504393 298 ntBASIC6.37□□□□□ -1.39
NEK3P51956 SNX18P24-201ENST00000505249 671 ntBASIC6.37□□□□□ -1.39
NEK3P51956 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.37□□□□□ -1.39
NEK3P51956 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.37□□□□□ -1.39
NEK3P51956 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.37□□□□□ -1.39
NEK3P51956 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.37□□□□□ -1.39
NEK3P51956 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.37□□□□□ -1.39
NEK3P51956 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 AC134669.1-201ENST00000581275 672 ntBASIC6.37□□□□□ -1.39
NEK3P51956 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 AL499605.1-201ENST00000604628 403 ntBASIC6.37□□□□□ -1.39
NEK3P51956 AL008723.3-201ENST00000608926 449 ntBASIC6.37□□□□□ -1.39
NEK3P51956 AC018645.2-201ENST00000609151 472 ntBASIC6.37□□□□□ -1.39
NEK3P51956 AC021106.3-201ENST00000623925 531 ntBASIC6.37□□□□□ -1.39
NEK3P51956 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.37□□□□□ -1.39
NEK3P51956 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 AC092724.1-201ENST00000624623 3397 ntBASIC6.37□□□□□ -1.39
NEK3P51956 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.37□□□□□ -1.39
NEK3P51956 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEK3P51956 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NEK3P51956 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NEK3P51956 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NEK3P51956 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NEK3P51956 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.36□□□□□ -1.39
NEK3P51956 AL034546.1-201ENST00000623740 3693 ntBASIC6.36□□□□□ -1.39
NEK3P51956 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NEK3P51956 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NEK3P51956 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NEK3P51956 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NEK3P51956 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms