Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
COL15A1P39059 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL15A1P39059 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.2□□□□□ -1.26
COL15A1P39059 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.2□□□□□ -1.26
COL15A1P39059 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL15A1P39059 AC009962.1-201ENST00000567327 3813 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
COL15A1P39059 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.2□□□□□ -1.26
COL15A1P39059 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
COL15A1P39059 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL15A1P39059 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL15A1P39059 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL15A1P39059 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
COL15A1P39059 AL390774.1-201ENST00000411924 246 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.2□□□□□ -1.26
COL15A1P39059 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.2□□□□□ -1.26
COL15A1P39059 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.2□□□□□ -1.26
COL15A1P39059 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC7.2□□□□□ -1.26
COL15A1P39059 RNU1-88P-201ENST00000459274 128 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.2□□□□□ -1.26
COL15A1P39059 CBX1P5-201ENST00000475330 559 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 RPSAP50-201ENST00000481955 852 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 AC004453.1-201ENST00000487895 408 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 RN7SKP248-201ENST00000516278 305 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.2□□□□□ -1.26
COL15A1P39059 EIF4A2P5-201ENST00000529914 499 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC7.2□□□□□ -1.26
COL15A1P39059 AC000068.2-201ENST00000608816 460 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 Mico1.1-201ENST00000611698 204 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL15A1P39059 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC7.2□□□□□ -1.26
COL15A1P39059 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.2□□□□□ -1.26
COL15A1P39059 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
COL15A1P39059 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.19□□□□□ -1.26
COL15A1P39059 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
COL15A1P39059 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 AC007998.4-201ENST00000612496 2533 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
COL15A1P39059 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
COL15A1P39059 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.19□□□□□ -1.26
COL15A1P39059 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
COL15A1P39059 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
COL15A1P39059 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.19□□□□□ -1.26
COL15A1P39059 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.19□□□□□ -1.26
COL15A1P39059 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.19□□□□□ -1.26
COL15A1P39059 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 AC009779.8-201ENST00000641684 4384 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 AC034229.2-201ENST00000566945 2508 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.19□□□□□ -1.26
COL15A1P39059 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 RNA5SP443-201ENST00000363083 132 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 RN7SKP216-201ENST00000411050 312 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 RPS3AP38-201ENST00000435889 763 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC7.19□□□□□ -1.26
COL15A1P39059 RPL7AP6-201ENST00000477943 801 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
COL15A1P39059 AL133372.1-201ENST00000493565 745 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.19□□□□□ -1.26
COL15A1P39059 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
COL15A1P39059 RN7SL708P-201ENST00000580952 299 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 SETP3-201ENST00000581726 813 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.19□□□□□ -1.26
COL15A1P39059 AC010615.3-201ENST00000597319 394 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.19□□□□□ -1.26
COL15A1P39059 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC7.19□□□□□ -1.26
COL15A1P39059 SAMMSON-209ENST00000641222 1100 ntBASIC7.19□□□□□ -1.26
COL15A1P39059 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL15A1P39059 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
COL15A1P39059 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
COL15A1P39059 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 AC007938.2-201ENST00000604666 2634 ntBASIC7.18□□□□□ -1.26
COL15A1P39059 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
COL15A1P39059 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
COL15A1P39059 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.18□□□□□ -1.26
COL15A1P39059 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
COL15A1P39059 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.18□□□□□ -1.26
COL15A1P39059 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
COL15A1P39059 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL15A1P39059 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms