Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
USH2AO75445 PARN-201ENST00000341484 2100 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 AL353795.3-201ENST00000624351 5702 ntBASIC2.37□□□□□ -2.03
USH2AO75445 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 AC114774.1-201ENST00000507410 1770 ntBASIC2.37□□□□□ -2.03
USH2AO75445 CAST-222ENST00000508579 1758 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 SNORA9-201ENST00000384215 133 ntBASIC2.37□□□□□ -2.03
USH2AO75445 RPS3AP23-201ENST00000401762 784 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC2.37□□□□□ -2.03
USH2AO75445 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 AL596266.1-201ENST00000448132 400 ntBASIC2.37□□□□□ -2.03
USH2AO75445 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC2.37□□□□□ -2.03
USH2AO75445 AC025884.1-201ENST00000556034 378 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AC009237.13-201ENST00000603193 276 ntBASIC2.37□□□□□ -2.03
USH2AO75445 UBA3-213ENST00000631029 123 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC2.37□□□□□ -2.03
USH2AO75445 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 RNA5SP447-201ENST00000363749 119 ntBASIC2.37□□□□□ -2.03
USH2AO75445 RNA5SP487-201ENST00000410186 122 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 MTND6P5-201ENST00000448266 512 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 RNA5SP464-201ENST00000516251 108 ntBASIC2.37□□□□□ -2.03
USH2AO75445 OR8R1P-201ENST00000543943 764 ntBASIC2.37□□□□□ -2.03
USH2AO75445 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 AC009597.2-201ENST00000604659 592 ntBASIC2.37□□□□□ -2.03
USH2AO75445 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC2.37□□□□□ -2.03
USH2AO75445 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC2.37□□□□□ -2.03
USH2AO75445 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC2.37□□□□□ -2.03
USH2AO75445 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH2AO75445 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC2.37□□□□□ -2.03
USH2AO75445 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
USH2AO75445 MIR541-201ENST00000401360 84 ntBASIC2.36□□□□□ -2.03
USH2AO75445 NDUFB4P4-201ENST00000404822 243 ntBASIC2.36□□□□□ -2.03
USH2AO75445 RPL36AP36-201ENST00000418616 301 ntBASIC2.36□□□□□ -2.03
USH2AO75445 AC011276.1-201ENST00000469688 323 ntBASIC2.36□□□□□ -2.03
USH2AO75445 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC2.36□□□□□ -2.03
USH2AO75445 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC2.36□□□□□ -2.03
USH2AO75445 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 MYO5A-205ENST00000399231 12225 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
USH2AO75445 ITPK1-AS1-201ENST00000553639 4701 ntBASIC2.36□□□□□ -2.03
USH2AO75445 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms