Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 USP24P1-201ENST00000433802 779 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2□□□□□ -2.09
HMCN1Q96RW7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2□□□□□ -2.09
HMCN1Q96RW7 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 AURKAPS2-201ENST00000454983 333 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 ELOCP24-201ENST00000456370 334 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 AL355032.1-201ENST00000472981 438 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 AC026414.1-201ENST00000504046 698 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC2□□□□□ -2.09
HMCN1Q96RW7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC2□□□□□ -2.09
HMCN1Q96RW7 AC009646.1-201ENST00000510455 318 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC2□□□□□ -2.09
HMCN1Q96RW7 PGAM4P2-201ENST00000512491 721 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 AC026402.1-201ENST00000513642 170 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC2□□□□□ -2.09
HMCN1Q96RW7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC2□□□□□ -2.09
HMCN1Q96RW7 AC007956.1-201ENST00000555623 542 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC2□□□□□ -2.09
HMCN1Q96RW7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2□□□□□ -2.09
HMCN1Q96RW7 AC011260.1-201ENST00000578420 472 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 MIR4437-201ENST00000581331 60 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC2□□□□□ -2.09
HMCN1Q96RW7 AL391834.1-201ENST00000609609 560 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 AC091953.3-201ENST00000623220 236 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 AC004696.2-201ENST00000624022 331 ntTSL 3 BASIC2□□□□□ -2.09
HMCN1Q96RW7 AC127071.1-201ENST00000624997 712 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 FRG1DP-201ENST00000635586 771 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC2□□□□□ -2.09
HMCN1Q96RW7 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 TCP1P3-201ENST00000414406 1498 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 RGS4-204ENST00000421743 3311 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 C1orf116-201ENST00000359470 5493 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC2□□□□□ -2.09
HMCN1Q96RW7 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
HMCN1Q96RW7 AC110716.2-201ENST00000563865 3945 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 ZSWIM5P3-201ENST00000511265 2743 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 NEK2P2-201ENST00000438441 1338 ntBASIC2□□□□□ -2.09
HMCN1Q96RW7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
HMCN1Q96RW7 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC2□□□□□ -2.09
HMCN1Q96RW7 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC2□□□□□ -2.09
HMCN1Q96RW7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMCN1Q96RW7 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 RNU5A-2P-201ENST00000384337 116 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 HMGB1P49-201ENST00000418882 569 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 MTCO2P20-201ENST00000437339 673 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AL592447.1-201ENST00000447592 540 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AL445665.1-202ENST00000452436 324 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 MTND2P39-201ENST00000457230 764 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 ACA64.1-201ENST00000459171 127 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 RN7SL72P-201ENST00000460697 269 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC090114.3-201ENST00000479267 829 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC108475.1-201ENST00000507880 950 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC011352.1-201ENST00000512300 793 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AP000769.2-201ENST00000602344 396 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC025811.1-201ENST00000604312 472 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC006157.1-201ENST00000611750 366 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AL359513.1-201ENST00000614364 557 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 RFPL4AP6-201ENST00000616792 846 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AC009248.2-201ENST00000619826 254 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AL607023.1-201ENST00000620045 248 ntBASIC1.99□□□□□ -2.09
HMCN1Q96RW7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 MYRIP-210ENST00000539167 4635 ntTSL 2 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 SLFN11-201ENST00000308377 4910 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HMCN1Q96RW7 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms