Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS13AQ96RL7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 ASNSP1-204ENST00000641977 1664 ntBASIC5.27□□□□□ -1.57
VPS13AQ96RL7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 BMS1P19-201ENST00000433925 393 ntBASIC5.27□□□□□ -1.57
VPS13AQ96RL7 GSTM5P1-201ENST00000434751 660 ntBASIC5.27□□□□□ -1.57
VPS13AQ96RL7 RPL36AP15-201ENST00000444514 266 ntBASIC5.27□□□□□ -1.57
VPS13AQ96RL7 AC068522.1-201ENST00000482895 345 ntBASIC5.27□□□□□ -1.57
VPS13AQ96RL7 AC067959.1-201ENST00000604334 379 ntBASIC5.27□□□□□ -1.57
VPS13AQ96RL7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 TPM3P3-201ENST00000521343 354 ntBASIC5.27□□□□□ -1.57
VPS13AQ96RL7 AC244502.2-201ENST00000543361 851 ntBASIC5.27□□□□□ -1.57
VPS13AQ96RL7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 AC020765.1-201ENST00000604296 328 ntBASIC5.27□□□□□ -1.57
VPS13AQ96RL7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS13AQ96RL7 GAPDHP15-201ENST00000398586 975 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 RNU2-50P-201ENST00000410494 143 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 GPS2P1-201ENST00000411761 986 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 RPSAP35-201ENST00000413753 818 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 MRPS21P2-201ENST00000424704 264 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AC063943.1-201ENST00000465434 453 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AC105384.2-201ENST00000508433 640 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 OR4H6P-201ENST00000563771 921 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AP005432.2-201ENST00000608162 586 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AC005962.2-201ENST00000611427 652 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 LRRC37A6P-202ENST00000448648 5444 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AC114876.1-201ENST00000490962 1366 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AL121886.1-201ENST00000358609 435 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 SNORA84-201ENST00000459229 133 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AC104964.2-201ENST00000562242 4641 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 RN7SKP151-201ENST00000410230 316 ntBASIC5.26□□□□□ -1.57
VPS13AQ96RL7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS13AQ96RL7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 ATG4AP1-201ENST00000416893 538 ntBASIC5.25□□□□□ -1.57
VPS13AQ96RL7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS13AQ96RL7 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms