Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SNORA31.13-201ENST00000516624 135 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 RNU2-46P-201ENST00000517038 113 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 RANP9-201ENST00000519957 271 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 ST13P6-201ENST00000522430 1102 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 APOOP3-201ENST00000536787 586 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 GMFG-204ENST00000595636 487 ntTSL 2 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AL596327.1-201ENST00000603629 213 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AC068234.2-201ENST00000619646 522 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 U6.107-201ENST00000637108 79 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 AC099654.15-201ENST00000639802 509 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AL031595.3-201ENST00000624919 14262 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 TRIM60P19-201ENST00000452879 1462 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.7□□□□□ -1.02
VARS2Q5ST30 TARS2P1-201ENST00000506124 2041 ntBASIC8.7□□□□□ -1.02
VARS2Q5ST30 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
VARS2Q5ST30 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 EXOC7P1-201ENST00000509881 2059 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 CEP85-209ENST00000640292 2286 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 MIR135B-201ENST00000362189 97 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 RNU6-223P-201ENST00000362830 107 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 Y_RNA.153-201ENST00000363615 91 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 U8.14-201ENST00000390843 143 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 RPS4XP8-201ENST00000402039 771 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 RPL7P57-201ENST00000423238 740 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 PIGPP3-201ENST00000425307 415 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 NRBF2P3-201ENST00000432731 865 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 AL606489.2-201ENST00000433886 234 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 GTF2F2P2-201ENST00000445825 721 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 DNAJB5P1-201ENST00000454004 806 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 NUTF2P4-201ENST00000458353 381 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC016489.1-201ENST00000461109 375 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC091564.1-201ENST00000464563 479 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC009022.1-201ENST00000472115 496 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 RPL22P13-201ENST00000493291 347 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 NPM1P41-201ENST00000512920 831 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 RNU6-408P-201ENST00000515910 100 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 RN7SKP147-201ENST00000517154 244 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 ARL6IP1P3-201ENST00000524544 560 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC011611.6-201ENST00000547483 255 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC009779.4-201ENST00000554248 611 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 SUB1P2-201ENST00000556401 297 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 RN7SL154P-201ENST00000578043 324 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 NDUFA3P1-201ENST00000588007 252 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 AL390838.2-201ENST00000602394 274 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC020634.1-201ENST00000608701 549 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC241377.2-202ENST00000636462 997 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC241585.4-201ENST00000640951 686 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms