Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CHRNB3Q05901 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNB3Q05901 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
CHRNB3Q05901 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNB3Q05901 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNB3Q05901 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNB3Q05901 MFSD8-219ENST00000641228 2559 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 AP000473.2-201ENST00000602659 1537 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNB3Q05901 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 RN7SKP81-201ENST00000365603 331 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 U3.28-201ENST00000391249 210 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC079807.1-201ENST00000429993 481 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC110602.1-201ENST00000437414 318 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 AL590004.3-202ENST00000445883 451 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC111000.5-201ENST00000506559 1178 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 CR383658.1-201ENST00000514609 734 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC090286.3-201ENST00000573133 187 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AC005726.4-201ENST00000582858 458 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 AP005136.2-201ENST00000583253 1049 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AL137246.1-201ENST00000607072 977 ntBASIC5.4□□□□□ -1.54
CHRNB3Q05901 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CHRNB3Q05901 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNB3Q05901 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNB3Q05901 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNB3Q05901 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.4□□□□□ -1.55
CHRNB3Q05901 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNB3Q05901 AP005435.3-201ENST00000531260 3198 ntBASIC5.4□□□□□ -1.55
CHRNB3Q05901 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNB3Q05901 CDY11P-201ENST00000447168 1651 ntBASIC5.4□□□□□ -1.55
CHRNB3Q05901 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.4□□□□□ -1.55
CHRNB3Q05901 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNB3Q05901 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.4□□□□□ -1.55
CHRNB3Q05901 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CHRNB3Q05901 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.4□□□□□ -1.55
CHRNB3Q05901 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CHRNB3Q05901 AC093225.1-201ENST00000506867 1408 ntBASIC5.4□□□□□ -1.55
CHRNB3Q05901 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 MTCO1P46-201ENST00000451639 1491 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNB3Q05901 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNB3Q05901 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 AC104964.3-201ENST00000606115 2860 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 MTCO1P7-201ENST00000419523 1542 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNB3Q05901 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNB3Q05901 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNB3Q05901 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNB3Q05901 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 RNU1-134P-201ENST00000362935 165 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNB3Q05901 AC004386.1-201ENST00000393214 761 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 VN1R3-201ENST00000418822 919 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 AC130360.1-201ENST00000425489 1117 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 OR7E116P-201ENST00000448529 957 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 PSAT1P4-201ENST00000466500 526 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 AC023245.1-201ENST00000468501 517 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 AC098847.1-201ENST00000473094 348 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 NPM1P28-201ENST00000492269 840 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 AC090568.1-201ENST00000509499 856 ntBASIC5.39□□□□□ -1.55
CHRNB3Q05901 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNB3Q05901 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms