Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN20P56880 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN20P56880 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN20P56880 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CLDN20P56880 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CLDN20P56880 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN20P56880 RNFT1P3-201ENST00000340898 1052 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 U3.10-201ENST00000364459 214 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN20P56880 RAB9AP4-201ENST00000415230 609 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN20P56880 NPM1P26-201ENST00000426339 738 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN20P56880 AC073410.1-201ENST00000435125 589 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 RPS3AP38-201ENST00000435889 763 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 AC074367.1-201ENST00000438685 1125 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN20P56880 TRIM60P16-201ENST00000444048 694 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 AC016027.4-201ENST00000450866 277 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 CST12P-201ENST00000457644 362 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 NDUFA5P5-201ENST00000468361 342 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 NPM1P28-201ENST00000492269 840 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 MTND3P24-201ENST00000506306 329 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN20P56880 CYP4F27P-201ENST00000514557 494 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.45□□□□□ -1.54
CLDN20P56880 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.45□□□□□ -1.54
CLDN20P56880 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN20P56880 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN20P56880 AC019322.1-201ENST00000571869 389 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 AC005726.4-201ENST00000582858 458 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.45□□□□□ -1.54
CLDN20P56880 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN20P56880 AL138895.2-201ENST00000603019 178 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 AC004890.3-201ENST00000605566 1095 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 AC024884.1-201ENST00000620583 399 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 AL136228.1-201ENST00000622221 319 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN20P56880 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN20P56880 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CLDN20P56880 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN20P56880 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.45□□□□□ -1.54
CLDN20P56880 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN20P56880 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CLDN20P56880 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN20P56880 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN20P56880 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN20P56880 AC005261.2-201ENST00000593427 4258 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 QRSL1P1-201ENST00000400977 1540 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.44□□□□□ -1.54
CLDN20P56880 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN20P56880 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN20P56880 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN20P56880 OR10R3P-201ENST00000361688 942 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 MIR365B-201ENST00000362317 111 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN20P56880 PEX12P1-201ENST00000400284 1048 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 AL096711.1-201ENST00000404780 554 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 MIR1282-201ENST00000408865 101 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN20P56880 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN20P56880 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.44□□□□□ -1.54
CLDN20P56880 AL158827.1-201ENST00000416300 391 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.44□□□□□ -1.54
CLDN20P56880 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN20P56880 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN20P56880 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.44□□□□□ -1.54
CLDN20P56880 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN20P56880 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN20P56880 AC005077.1-201ENST00000449226 375 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CLDN20P56880 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN20P56880 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN20P56880 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN20P56880 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN20P56880 AC025458.1-201ENST00000506046 166 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN20P56880 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CLDN20P56880 OR5H7P-201ENST00000514084 930 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 TPM3P3-201ENST00000521343 354 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.44□□□□□ -1.54
CLDN20P56880 OR56A7P-201ENST00000524865 941 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 AP003396.4-201ENST00000527574 265 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN20P56880 AC007956.1-201ENST00000555623 542 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.44□□□□□ -1.54
CLDN20P56880 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.44□□□□□ -1.54
CLDN20P56880 RPA2P1-201ENST00000556557 721 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN20P56880 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN20P56880 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN20P56880 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.44□□□□□ -1.54
CLDN20P56880 AC002069.2-201ENST00000603580 883 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 AC016542.1-201ENST00000608259 493 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 AL136097.3-201ENST00000611097 505 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 AC245014.3-201ENST00000618589 347 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CLDN20P56880 FO681491.1-202ENST00000623392 737 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 LINC00216-201ENST00000623548 1126 ntBASIC5.44□□□□□ -1.54
CLDN20P56880 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms