Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SMIM12P1-201ENST00000603004 274 ntBASIC5.81□□□□□ -1.48
PCNAP12004 AC002069.2-201ENST00000603580 883 ntBASIC5.81□□□□□ -1.48
PCNAP12004 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.81□□□□□ -1.48
PCNAP12004 AC074276.2-201ENST00000619891 348 ntBASIC5.81□□□□□ -1.48
PCNAP12004 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.81□□□□□ -1.48
PCNAP12004 AC099654.15-201ENST00000639802 509 ntBASIC5.81□□□□□ -1.48
PCNAP12004 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCNAP12004 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
PCNAP12004 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
PCNAP12004 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCNAP12004 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PCNAP12004 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCNAP12004 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.8□□□□□ -1.48
PCNAP12004 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.8□□□□□ -1.48
PCNAP12004 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.8□□□□□ -1.48
PCNAP12004 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.8□□□□□ -1.48
PCNAP12004 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.8□□□□□ -1.48
PCNAP12004 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCNAP12004 MTCO1P28-201ENST00000574177 1528 ntBASIC5.8□□□□□ -1.48
PCNAP12004 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.8□□□□□ -1.48
PCNAP12004 RNA5SP232-201ENST00000364144 119 ntBASIC5.8□□□□□ -1.48
PCNAP12004 SNORA77.2-201ENST00000408571 112 ntBASIC5.8□□□□□ -1.48
PCNAP12004 AL354868.1-201ENST00000417077 482 ntBASIC5.8□□□□□ -1.48
PCNAP12004 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.8□□□□□ -1.48
PCNAP12004 NPM1P26-201ENST00000426339 738 ntBASIC5.8□□□□□ -1.48
PCNAP12004 MTND4LP14-201ENST00000429447 288 ntBASIC5.8□□□□□ -1.48
PCNAP12004 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCNAP12004 SDR42E1P3-201ENST00000438345 502 ntBASIC5.8□□□□□ -1.48
PCNAP12004 CUBNP2-201ENST00000443534 1139 ntBASIC5.8□□□□□ -1.48
PCNAP12004 RPL5P10-201ENST00000445207 894 ntBASIC5.8□□□□□ -1.48
PCNAP12004 FTLP8-201ENST00000446770 267 ntBASIC5.8□□□□□ -1.48
PCNAP12004 HMGB1P7-201ENST00000450921 612 ntBASIC5.8□□□□□ -1.48
PCNAP12004 Z83838.1-202ENST00000456225 839 ntBASIC5.8□□□□□ -1.48
PCNAP12004 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.8□□□□□ -1.48
PCNAP12004 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.8□□□□□ -1.48
PCNAP12004 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.8□□□□□ -1.48
PCNAP12004 RN7SKP288-201ENST00000516227 268 ntBASIC5.8□□□□□ -1.48
PCNAP12004 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.8□□□□□ -1.48
PCNAP12004 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.8□□□□□ -1.48
PCNAP12004 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCNAP12004 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.8□□□□□ -1.48
PCNAP12004 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.8□□□□□ -1.48
PCNAP12004 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCNAP12004 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.8□□□□□ -1.48
PCNAP12004 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.8□□□□□ -1.48
PCNAP12004 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.8□□□□□ -1.48
PCNAP12004 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCNAP12004 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.8□□□□□ -1.48
PCNAP12004 AC084036.1-201ENST00000609190 508 ntBASIC5.8□□□□□ -1.48
PCNAP12004 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.8□□□□□ -1.48
PCNAP12004 uc_338.31-201ENST00000615595 186 ntBASIC5.8□□□□□ -1.48
PCNAP12004 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.8□□□□□ -1.48
PCNAP12004 FAM27E2-201ENST00000619668 403 ntBASIC5.8□□□□□ -1.48
PCNAP12004 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.8□□□□□ -1.48
PCNAP12004 AC099654.6-201ENST00000636487 512 ntBASIC5.8□□□□□ -1.48
PCNAP12004 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
PCNAP12004 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.8□□□□□ -1.48
PCNAP12004 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCNAP12004 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCNAP12004 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.8□□□□□ -1.48
PCNAP12004 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCNAP12004 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCNAP12004 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCNAP12004 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PCNAP12004 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCNAP12004 PPBPP2-201ENST00000513150 1362 ntBASIC5.8□□□□□ -1.48
PCNAP12004 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.8□□□□□ -1.48
PCNAP12004 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
PCNAP12004 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
PCNAP12004 CASC19-260ENST00000641828 2001 ntBASIC5.79□□□□□ -1.48
PCNAP12004 SMG1P7-201ENST00000565246 2704 ntBASIC5.79□□□□□ -1.48
PCNAP12004 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.79□□□□□ -1.48
PCNAP12004 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCNAP12004 RNU4-39P-201ENST00000362455 127 ntBASIC5.79□□□□□ -1.48
PCNAP12004 MIR421-201ENST00000365696 85 ntBASIC5.79□□□□□ -1.48
PCNAP12004 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.79□□□□□ -1.48
PCNAP12004 RBBP4P5-201ENST00000398583 1266 ntBASIC5.79□□□□□ -1.48
PCNAP12004 CCNB2P1-201ENST00000399411 1150 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AL121977.1-201ENST00000401636 979 ntBASIC5.79□□□□□ -1.48
PCNAP12004 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.79□□□□□ -1.48
PCNAP12004 AMZ2P2-201ENST00000406819 1057 ntBASIC5.79□□□□□ -1.48
PCNAP12004 RN7SKP166-201ENST00000410812 305 ntBASIC5.79□□□□□ -1.48
PCNAP12004 RN7SKP17-201ENST00000411242 351 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.79□□□□□ -1.48
PCNAP12004 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.79□□□□□ -1.48
PCNAP12004 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 NMD3P2-201ENST00000421815 761 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.79□□□□□ -1.48
PCNAP12004 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 USP24P1-201ENST00000433802 779 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms