Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
CUX2O14529 GLULP6-201ENST00000399502 913 ntBASIC9.64□□□□□ -0.87
CUX2O14529 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC9.64□□□□□ -0.87
CUX2O14529 RPS3AP38-201ENST00000435889 763 ntBASIC9.64□□□□□ -0.87
CUX2O14529 AC015983.1-201ENST00000441577 373 ntBASIC9.64□□□□□ -0.87
CUX2O14529 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC9.64□□□□□ -0.87
CUX2O14529 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC9.64□□□□□ -0.87
CUX2O14529 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC9.64□□□□□ -0.87
CUX2O14529 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CUX2O14529 AC104118.1-201ENST00000607625 1589 ntBASIC9.64□□□□□ -0.87
CUX2O14529 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CUX2O14529 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CUX2O14529 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CUX2O14529 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CUX2O14529 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
CUX2O14529 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CUX2O14529 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
CUX2O14529 RNA5SP515-201ENST00000364570 118 ntBASIC9.63□□□□□ -0.87
CUX2O14529 RNU2-50P-201ENST00000410494 143 ntBASIC9.63□□□□□ -0.87
CUX2O14529 MYL6P5-201ENST00000412707 459 ntBASIC9.63□□□□□ -0.87
CUX2O14529 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC9.63□□□□□ -0.87
CUX2O14529 CCNB1IP1P2-201ENST00000432876 818 ntBASIC9.63□□□□□ -0.87
CUX2O14529 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC9.63□□□□□ -0.87
CUX2O14529 CCDC11P1-201ENST00000503137 1162 ntBASIC9.63□□□□□ -0.87
CUX2O14529 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC9.63□□□□□ -0.87
CUX2O14529 TPM3P3-201ENST00000521343 354 ntBASIC9.63□□□□□ -0.87
CUX2O14529 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC9.63□□□□□ -0.87
CUX2O14529 AC024940.3-201ENST00000538551 316 ntBASIC9.63□□□□□ -0.87
CUX2O14529 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC9.63□□□□□ -0.87
CUX2O14529 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC9.63□□□□□ -0.87
CUX2O14529 RPL26P30-202ENST00000602923 645 ntBASIC9.63□□□□□ -0.87
CUX2O14529 AC027334.1-201ENST00000603257 310 ntBASIC9.63□□□□□ -0.87
CUX2O14529 AC135068.12-201ENST00000637370 931 ntBASIC9.63□□□□□ -0.87
CUX2O14529 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CUX2O14529 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
CUX2O14529 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CUX2O14529 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC9.63□□□□□ -0.87
CUX2O14529 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CUX2O14529 HNRNPA1P54-201ENST00000411857 9714 ntBASIC9.63□□□□□ -0.87
CUX2O14529 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CUX2O14529 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CUX2O14529 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC9.62□□□□□ -0.87
CUX2O14529 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CUX2O14529 MAPK10-338ENST00000641647 3362 ntBASIC9.62□□□□□ -0.87
CUX2O14529 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
CUX2O14529 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC9.62□□□□□ -0.87
CUX2O14529 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC9.62□□□□□ -0.87
CUX2O14529 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CUX2O14529 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
CUX2O14529 AL591848.1-201ENST00000413092 322 ntBASIC9.62□□□□□ -0.87
CUX2O14529 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC9.62□□□□□ -0.87
CUX2O14529 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
CUX2O14529 RPL23AP40-201ENST00000487630 390 ntBASIC9.62□□□□□ -0.87
CUX2O14529 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC9.62□□□□□ -0.87
CUX2O14529 AC008147.3-201ENST00000548666 354 ntBASIC9.62□□□□□ -0.87
CUX2O14529 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC9.62□□□□□ -0.87
CUX2O14529 AL034374.2-201ENST00000605281 548 ntBASIC9.62□□□□□ -0.87
CUX2O14529 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
CUX2O14529 MIPEPP2-201ENST00000422560 1819 ntBASIC9.62□□□□□ -0.87
CUX2O14529 AL662795.2-201ENST00000624252 3706 ntBASIC9.62□□□□□ -0.87
CUX2O14529 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC9.62□□□□□ -0.87
CUX2O14529 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC9.62□□□□□ -0.87
CUX2O14529 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CUX2O14529 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CUX2O14529 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC9.62□□□□□ -0.87
CUX2O14529 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CUX2O14529 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CUX2O14529 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
CUX2O14529 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CUX2O14529 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC9.61□□□□□ -0.87
CUX2O14529 RNU1-149P-201ENST00000390870 161 ntBASIC9.61□□□□□ -0.87
CUX2O14529 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
CUX2O14529 AC211486.3-201ENST00000412694 621 ntBASIC9.61□□□□□ -0.87
CUX2O14529 AC006946.1-201ENST00000429106 328 ntBASIC9.61□□□□□ -0.87
CUX2O14529 AL035690.1-201ENST00000490892 383 ntBASIC9.61□□□□□ -0.87
CUX2O14529 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
CUX2O14529 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
CUX2O14529 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CUX2O14529 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CUX2O14529 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CUX2O14529 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CUX2O14529 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
CUX2O14529 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
CUX2O14529 AC092724.1-201ENST00000624623 3397 ntBASIC9.61□□□□□ -0.87
CUX2O14529 AC008957.3-201ENST00000624112 2242 ntBASIC9.61□□□□□ -0.87
CUX2O14529 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CUX2O14529 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
CUX2O14529 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CUX2O14529 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CUX2O14529 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CUX2O14529 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
CUX2O14529 SNURFL-201ENST00000309296 343 ntBASIC9.6□□□□□ -0.87
CUX2O14529 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC9.6□□□□□ -0.87
CUX2O14529 MGAT2P2-201ENST00000427194 797 ntBASIC9.6□□□□□ -0.87
CUX2O14529 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC9.6□□□□□ -0.87
CUX2O14529 LDHAP2-201ENST00000437325 985 ntBASIC9.6□□□□□ -0.87
CUX2O14529 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC9.6□□□□□ -0.87
CUX2O14529 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC9.6□□□□□ -0.87
CUX2O14529 AC233699.1-201ENST00000569955 1168 ntBASIC9.6□□□□□ -0.87
CUX2O14529 AC109583.2-201ENST00000617367 129 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms