Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 AC096921.2-201ENST00000561507 1916 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 U3.10-201ENST00000364459 214 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 AL358178.1-201ENST00000407698 397 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 AL139805.1-201ENST00000407837 289 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 RPL21P50-201ENST00000417698 477 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 AC112492.2-201ENST00000432774 1030 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 USP24P1-201ENST00000433802 779 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 RN7SL860P-201ENST00000473738 223 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 AC092593.2-201ENST00000513866 913 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 AC111000.6-201ENST00000514471 709 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 OR4A43P-201ENST00000532938 908 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 AC006272.2-201ENST00000594725 163 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 AL049840.6-201ENST00000604583 345 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 AP000864.1-201ENST00000609424 650 ntBASIC5.92□□□□□ -1.46
TRIM4Q9C037 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
TRIM4Q9C037 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM4Q9C037 AC016583.1-201ENST00000624221 2431 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM4Q9C037 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 AP001541.1-201ENST00000623322 1904 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM4Q9C037 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM4Q9C037 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM4Q9C037 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM4Q9C037 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 OR52B3P-201ENST00000314715 928 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 RNA5SP477-201ENST00000362639 119 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 AL157702.1-201ENST00000398764 426 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 AL445238.1-204ENST00000400311 463 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 DHFRP2-201ENST00000414224 547 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 AC079809.1-201ENST00000415468 276 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 AL121776.1-201ENST00000429337 372 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM4Q9C037 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 YWHAEP1-201ENST00000453697 763 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 IGHV4-55-201ENST00000520889 368 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 AC135626.1-201ENST00000556983 435 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 AC092121.1-201ENST00000569452 202 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM4Q9C037 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TRIM4Q9C037 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM4Q9C037 AC125238.2-201ENST00000430003 1440 ntBASIC5.91□□□□□ -1.46
TRIM4Q9C037 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM4Q9C037 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 MIR433-201ENST00000384837 93 ntBASIC5.9□□□□□ -1.46
TRIM4Q9C037 OR2AT2P-201ENST00000413438 905 ntBASIC5.9□□□□□ -1.46
TRIM4Q9C037 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 AL355433.1-201ENST00000422804 300 ntBASIC5.9□□□□□ -1.46
TRIM4Q9C037 NANOGP4-201ENST00000427230 913 ntBASIC5.9□□□□□ -1.46
TRIM4Q9C037 NPM1P18-201ENST00000434232 732 ntBASIC5.9□□□□□ -1.46
TRIM4Q9C037 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.9□□□□□ -1.46
TRIM4Q9C037 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM4Q9C037 AL161722.1-201ENST00000446972 1032 ntBASIC5.9□□□□□ -1.46
TRIM4Q9C037 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms