Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CGREF1Q99674 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.42□□□□□ -1.54
CGREF1Q99674 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CGREF1Q99674 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CGREF1Q99674 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CGREF1Q99674 RNA5SP326-201ENST00000363209 110 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 MIR130A-201ENST00000385274 89 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 AC005042.1-201ENST00000393397 800 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 AL096711.1-201ENST00000404780 554 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.42□□□□□ -1.54
CGREF1Q99674 GPS2P1-201ENST00000411761 986 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.42□□□□□ -1.54
CGREF1Q99674 THEM7P-201ENST00000419556 672 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 AC009784.1-201ENST00000426484 460 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.42□□□□□ -1.54
CGREF1Q99674 GEMIN2P1-201ENST00000454246 752 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.42□□□□□ -1.54
CGREF1Q99674 ABCC13-202ENST00000463099 3842 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 AC099521.1-201ENST00000482557 334 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.42□□□□□ -1.54
CGREF1Q99674 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.42□□□□□ -1.54
CGREF1Q99674 MAST4-IT1-201ENST00000514241 658 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.42□□□□□ -1.54
CGREF1Q99674 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.42□□□□□ -1.54
CGREF1Q99674 WBP1LP12-201ENST00000604449 331 ntBASIC5.42□□□□□ -1.54
CGREF1Q99674 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.42□□□□□ -1.54
CGREF1Q99674 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.42□□□□□ -1.54
CGREF1Q99674 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.42□□□□□ -1.54
CGREF1Q99674 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CGREF1Q99674 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CGREF1Q99674 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.42□□□□□ -1.54
CGREF1Q99674 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CGREF1Q99674 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CGREF1Q99674 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.41□□□□□ -1.54
CGREF1Q99674 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CGREF1Q99674 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.41□□□□□ -1.54
CGREF1Q99674 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.41□□□□□ -1.54
CGREF1Q99674 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CGREF1Q99674 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
CGREF1Q99674 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 OR4F13P-202ENST00000560066 2054 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CGREF1Q99674 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CGREF1Q99674 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CGREF1Q99674 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.41□□□□□ -1.54
CGREF1Q99674 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CGREF1Q99674 U3.28-201ENST00000391249 210 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 RNF10P1-201ENST00000418589 369 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.41□□□□□ -1.54
CGREF1Q99674 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.41□□□□□ -1.54
CGREF1Q99674 TMEM183AP1-205ENST00000432739 290 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.41□□□□□ -1.54
CGREF1Q99674 GAPDHP48-201ENST00000436626 961 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 EIF5AP4-201ENST00000441206 465 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CGREF1Q99674 AL589765.3-201ENST00000446084 462 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.41□□□□□ -1.54
CGREF1Q99674 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.41□□□□□ -1.54
CGREF1Q99674 RPS23P2-201ENST00000463671 415 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.41□□□□□ -1.54
CGREF1Q99674 AC091544.1-201ENST00000484702 348 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.41□□□□□ -1.54
CGREF1Q99674 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.41□□□□□ -1.54
CGREF1Q99674 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.41□□□□□ -1.54
CGREF1Q99674 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.41□□□□□ -1.54
CGREF1Q99674 HMGN1P26-201ENST00000558737 303 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CGREF1Q99674 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.41□□□□□ -1.54
CGREF1Q99674 AL136131.3-201ENST00000607600 188 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 AL139124.1-201ENST00000609123 421 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 AC015819.1-201ENST00000613588 663 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 AL162574.1-201ENST00000615702 950 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 AL136228.1-201ENST00000622221 319 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CGREF1Q99674 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.41□□□□□ -1.54
CGREF1Q99674 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CGREF1Q99674 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CGREF1Q99674 AC004817.4-201ENST00000602396 3625 ntBASIC5.41□□□□□ -1.54
CGREF1Q99674 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.4□□□□□ -1.54
CGREF1Q99674 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CGREF1Q99674 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CGREF1Q99674 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CGREF1Q99674 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CGREF1Q99674 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CGREF1Q99674 AC006206.1-201ENST00000544842 3387 ntBASIC5.4□□□□□ -1.54
CGREF1Q99674 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CGREF1Q99674 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CGREF1Q99674 AC092681.1-201ENST00000297369 291 ntBASIC5.4□□□□□ -1.54
CGREF1Q99674 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms