Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 AC110926.1-201ENST00000412499 2825 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 THAP12P1-201ENST00000398672 2203 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 UGT2B24P-201ENST00000514441 1597 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 AC138409.1-201ENST00000505001 3598 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 RN7SKP15-201ENST00000364742 309 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 RN7SKP26-201ENST00000410247 293 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 RNU6-847P-201ENST00000411115 108 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 MTCYBP8-201ENST00000422855 651 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 RPL7P56-201ENST00000429441 717 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 YWHAEP5-201ENST00000431545 765 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 GTF2IP13-201ENST00000438487 386 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 SUMO2P10-201ENST00000452006 288 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 OR7E62P-201ENST00000456741 477 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 NPY6R-201ENST00000503807 1112 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 AC116917.1-201ENST00000520558 305 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 AC023442.1-201ENST00000531247 422 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 AC012603.1-201ENST00000606424 528 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 AC068831.8-201ENST00000620171 435 ntBASIC8.49□□□□□ -1.05
LRCH3Q96II8 KRT7-214ENST00000638501 398 ntTSL 5 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
LRCH3Q96II8 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LRCH3Q96II8 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 ATP13A4-201ENST00000295548 2157 ntTSL 5 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC114324.1-201ENST00000504077 3152 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 OR9R1P-201ENST00000412200 877 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC006065.1-201ENST00000422539 802 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 MTCO2P5-201ENST00000422621 426 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 MTCYBP9-201ENST00000431021 303 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 RPEP4-201ENST00000437636 602 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 RPL7P12-201ENST00000446719 750 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC005002.1-201ENST00000447458 540 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 SETP14-201ENST00000497538 873 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 NPM1P21-201ENST00000513394 762 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 Vault.2-201ENST00000516519 98 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC068631.3-201ENST00000538831 225 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 DPPA3P2-202ENST00000557188 1219 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 DNM1P31-201ENST00000564149 696 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC138749.2-201ENST00000566048 167 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 ATP5F1P7-201ENST00000567330 760 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 MIR5697-201ENST00000578045 78 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 MIR4666A-201ENST00000580160 79 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms