Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 RPL31P15-201ENST00000449770 338 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AC016724.1-201ENST00000453215 421 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 RNU1-88P-201ENST00000459274 128 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AC135999.1-201ENST00000478962 479 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 NENFP3-201ENST00000503735 313 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 GOLGA5P1-201ENST00000507317 980 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AC090424.1-201ENST00000535243 736 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AC015802.2-201ENST00000589690 189 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AL021368.1-201ENST00000607490 540 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC005224.3-201ENST00000584683 2140 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC140134.1-201ENST00000511830 3544 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 RN7SKP292-201ENST00000365522 317 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC244033.1-201ENST00000426826 870 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC097523.2-201ENST00000435551 652 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC017099.1-201ENST00000448261 1028 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 OSTCP1-201ENST00000455507 450 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 MTND3P6-201ENST00000485242 339 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 TRBV5-2-201ENST00000489095 273 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 OR52A4P-203ENST00000498233 1014 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 TOMM22P4-201ENST00000511318 336 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 MTATP6P1-201ENST00000514057 681 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 MIR4260-201ENST00000583107 67 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 AC022919.1-201ENST00000624979 626 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 FBXL21-201ENST00000297158 1305 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 RNF19BPY-201ENST00000458209 1550 ntBASIC6.23□□□□□ -1.41
SNX9Q9Y5X1 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AL357752.1-201ENST00000412817 349 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AC127526.2-201ENST00000426436 775 ntBASIC6.22□□□□□ -1.41
SNX9Q9Y5X1 AC104843.2-201ENST00000427666 297 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms