Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RN7SKP122-201ENST00000515923 296 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AC068993.1-201ENST00000546724 589 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AC032011.1-201ENST00000611703 1549 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 MAPK10-383ENST00000642032 3390 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AL022323.4-201ENST00000623980 13120 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 OR55B1P-203ENST00000641518 2602 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 MIR670-201ENST00000390142 98 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AC013399.1-201ENST00000450311 418 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AP006289.1-201ENST00000538089 277 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AC078878.1-201ENST00000539832 958 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AC127381.1-201ENST00000555979 939 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 MRPS5P4-201ENST00000592830 325 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AC015722.2-201ENST00000622210 551 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 ZNF101P1-201ENST00000435701 1720 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 ABCA11P-202ENST00000504019 2110 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 MIR541-201ENST00000401360 84 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 RMRPP5-201ENST00000411156 267 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 OR7E158P-201ENST00000524483 910 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 OR56A7P-201ENST00000524865 941 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AC021006.3-201ENST00000530771 192 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AC005962.2-201ENST00000611427 652 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 RBPJP2-201ENST00000618187 1444 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 USP48-203ENST00000374732 3037 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AC211486.3-201ENST00000412694 621 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 RPL32P33-201ENST00000487023 394 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AC024941.1-201ENST00000612250 334 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 MIR6716-201ENST00000613413 80 ntBASIC5.29□□□□□ -1.56
CHD8Q9HCK8 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD8Q9HCK8 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 RN7SKP224-201ENST00000364140 325 ntBASIC5.28□□□□□ -1.56
CHD8Q9HCK8 RNU1-43P-201ENST00000365052 165 ntBASIC5.28□□□□□ -1.56
CHD8Q9HCK8 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 CYCSP42-201ENST00000450823 238 ntBASIC5.28□□□□□ -1.56
CHD8Q9HCK8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.28□□□□□ -1.56
CHD8Q9HCK8 BGLT3-201ENST00000564523 994 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 297.2 ms