Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TOPBP1Q92547 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
TOPBP1Q92547 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TOPBP1Q92547 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC9.18□□□□□ -0.94
TOPBP1Q92547 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
TOPBP1Q92547 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC9.18□□□□□ -0.94
TOPBP1Q92547 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
TOPBP1Q92547 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC9.18□□□□□ -0.94
TOPBP1Q92547 AC068538.1-201ENST00000376856 336 ntBASIC9.18□□□□□ -0.94
TOPBP1Q92547 DDX39BP1-205ENST00000422507 192 ntBASIC9.18□□□□□ -0.94
TOPBP1Q92547 ZDHHC20P1-204ENST00000435787 423 ntBASIC9.18□□□□□ -0.94
TOPBP1Q92547 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC9.18□□□□□ -0.94
TOPBP1Q92547 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC9.18□□□□□ -0.94
TOPBP1Q92547 SCARNA16.4-201ENST00000516956 187 ntBASIC9.18□□□□□ -0.94
TOPBP1Q92547 MIR4737-201ENST00000583979 81 ntBASIC9.18□□□□□ -0.94
TOPBP1Q92547 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TOPBP1Q92547 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC9.18□□□□□ -0.94
TOPBP1Q92547 AC099494.2-201ENST00000623371 978 ntBASIC9.18□□□□□ -0.94
TOPBP1Q92547 AL356317.1-201ENST00000396110 1436 ntBASIC9.18□□□□□ -0.94
TOPBP1Q92547 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
TOPBP1Q92547 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TOPBP1Q92547 MT-RNR2-201ENST00000387347 1559 ntBASIC9.18□□□□□ -0.94
TOPBP1Q92547 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
TOPBP1Q92547 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TOPBP1Q92547 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TOPBP1Q92547 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC9.17□□□□□ -0.94
TOPBP1Q92547 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC9.17□□□□□ -0.94
TOPBP1Q92547 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC9.17□□□□□ -0.94
TOPBP1Q92547 HCG14-201ENST00000444986 413 ntTSL 2 BASIC9.17□□□□□ -0.94
TOPBP1Q92547 AC073072.2-201ENST00000447425 348 ntBASIC9.17□□□□□ -0.94
TOPBP1Q92547 TPT1P12-201ENST00000448968 492 ntBASIC9.17□□□□□ -0.94
TOPBP1Q92547 TRBV5-2-201ENST00000489095 273 ntBASIC9.17□□□□□ -0.94
TOPBP1Q92547 AC021006.3-201ENST00000530771 192 ntBASIC9.17□□□□□ -0.94
TOPBP1Q92547 AC006115.2-201ENST00000596823 202 ntBASIC9.17□□□□□ -0.94
TOPBP1Q92547 NANOGP3-201ENST00000605855 286 ntBASIC9.17□□□□□ -0.94
TOPBP1Q92547 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC9.17□□□□□ -0.94
TOPBP1Q92547 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TOPBP1Q92547 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TOPBP1Q92547 AL391262.1-201ENST00000556558 1992 ntBASIC9.17□□□□□ -0.94
TOPBP1Q92547 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
TOPBP1Q92547 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TOPBP1Q92547 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC9.17□□□□□ -0.94
TOPBP1Q92547 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TOPBP1Q92547 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TOPBP1Q92547 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC9.17□□□□□ -0.94
TOPBP1Q92547 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TOPBP1Q92547 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TOPBP1Q92547 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TOPBP1Q92547 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
TOPBP1Q92547 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TOPBP1Q92547 AC132825.1-201ENST00000463573 2247 ntBASIC9.17□□□□□ -0.94
TOPBP1Q92547 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TOPBP1Q92547 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 VN1R21P-201ENST00000426703 765 ntBASIC9.16□□□□□ -0.94
TOPBP1Q92547 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 NANOGP9-201ENST00000439890 892 ntBASIC9.16□□□□□ -0.94
TOPBP1Q92547 RN7SL385P-201ENST00000468873 276 ntBASIC9.16□□□□□ -0.94
TOPBP1Q92547 AC097484.1-201ENST00000471148 389 ntBASIC9.16□□□□□ -0.94
TOPBP1Q92547 TOMM22P4-201ENST00000511318 336 ntBASIC9.16□□□□□ -0.94
TOPBP1Q92547 IGHVIII-76-1-201ENST00000523776 286 ntBASIC9.16□□□□□ -0.94
TOPBP1Q92547 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 MIR5096-201ENST00000583713 70 ntBASIC9.16□□□□□ -0.94
TOPBP1Q92547 AC004836.1-201ENST00000623032 634 ntBASIC9.16□□□□□ -0.94
TOPBP1Q92547 AC130448.2-201ENST00000624082 374 ntBASIC9.16□□□□□ -0.94
TOPBP1Q92547 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TOPBP1Q92547 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TOPBP1Q92547 THAP12P4-201ENST00000528321 2266 ntBASIC9.16□□□□□ -0.94
TOPBP1Q92547 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TOPBP1Q92547 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
TOPBP1Q92547 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TOPBP1Q92547 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TOPBP1Q92547 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
TOPBP1Q92547 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.16□□□□□ -0.94
TOPBP1Q92547 NPM1P40-201ENST00000412758 733 ntBASIC9.15□□□□□ -0.94
TOPBP1Q92547 snoU13.20-201ENST00000459180 104 ntBASIC9.15□□□□□ -0.94
TOPBP1Q92547 PDCL3P4-201ENST00000489621 720 ntBASIC9.15□□□□□ -0.94
TOPBP1Q92547 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC9.15□□□□□ -0.94
TOPBP1Q92547 KRTAP5-14P-201ENST00000502328 121 ntBASIC9.15□□□□□ -0.94
TOPBP1Q92547 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC9.15□□□□□ -0.94
TOPBP1Q92547 AL513327.3-201ENST00000602618 469 ntBASIC9.15□□□□□ -0.94
TOPBP1Q92547 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC9.15□□□□□ -0.94
TOPBP1Q92547 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TOPBP1Q92547 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TOPBP1Q92547 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC9.15□□□□□ -0.94
TOPBP1Q92547 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TOPBP1Q92547 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
TOPBP1Q92547 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC9.15□□□□□ -0.94
TOPBP1Q92547 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TOPBP1Q92547 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
TOPBP1Q92547 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
TOPBP1Q92547 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms