Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 MIR1264-201ENST00000616374 69 ntBASIC5.69□□□□□ -1.5
CDH15P55291 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH15P55291 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH15P55291 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
CDH15P55291 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.69□□□□□ -1.5
CDH15P55291 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH15P55291 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
CDH15P55291 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH15P55291 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CDH15P55291 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH15P55291 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH15P55291 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH15P55291 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH15P55291 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH15P55291 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH15P55291 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH15P55291 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH15P55291 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDH15P55291 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDH15P55291 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 AC010132.4-201ENST00000569883 1368 ntBASIC5.68□□□□□ -1.5
CDH15P55291 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
CDH15P55291 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.68□□□□□ -1.5
CDH15P55291 RNU6-609P-201ENST00000365459 107 ntBASIC5.68□□□□□ -1.5
CDH15P55291 RNU6-650P-201ENST00000365658 111 ntBASIC5.68□□□□□ -1.5
CDH15P55291 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH15P55291 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDH15P55291 U3.23-201ENST00000391132 200 ntBASIC5.68□□□□□ -1.5
CDH15P55291 YWHAZP4-201ENST00000392459 708 ntBASIC5.68□□□□□ -1.5
CDH15P55291 AL034403.1-201ENST00000399414 885 ntBASIC5.68□□□□□ -1.5
CDH15P55291 AL445238.1-204ENST00000400311 463 ntBASIC5.68□□□□□ -1.5
CDH15P55291 RPL26P37-201ENST00000411983 438 ntBASIC5.68□□□□□ -1.5
CDH15P55291 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH15P55291 AL929472.1-201ENST00000417484 429 ntBASIC5.68□□□□□ -1.5
CDH15P55291 THEM7P-201ENST00000419556 672 ntBASIC5.68□□□□□ -1.5
CDH15P55291 ARL2BPP3-201ENST00000421226 480 ntBASIC5.68□□□□□ -1.5
CDH15P55291 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.68□□□□□ -1.5
CDH15P55291 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.68□□□□□ -1.5
CDH15P55291 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH15P55291 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.68□□□□□ -1.5
CDH15P55291 AKR1D1P1-201ENST00000457236 936 ntBASIC5.68□□□□□ -1.5
CDH15P55291 RPL5P13-201ENST00000462840 709 ntBASIC5.68□□□□□ -1.5
CDH15P55291 AC078857.1-201ENST00000469870 667 ntBASIC5.68□□□□□ -1.5
CDH15P55291 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.68□□□□□ -1.5
CDH15P55291 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH15P55291 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CDH15P55291 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH15P55291 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH15P55291 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH15P55291 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH15P55291 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH15P55291 RN7SKP70-201ENST00000516655 271 ntBASIC5.68□□□□□ -1.5
CDH15P55291 COX6B1P4-201ENST00000519826 484 ntBASIC5.68□□□□□ -1.5
CDH15P55291 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH15P55291 AC093014.1-201ENST00000548926 724 ntBASIC5.68□□□□□ -1.5
CDH15P55291 AC106785.3-201ENST00000564064 847 ntBASIC5.68□□□□□ -1.5
CDH15P55291 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 AC020916.2-201ENST00000591242 360 ntBASIC5.68□□□□□ -1.5
CDH15P55291 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH15P55291 SNX6P1-201ENST00000601728 1224 ntBASIC5.68□□□□□ -1.5
CDH15P55291 AC125494.2-201ENST00000602431 657 ntBASIC5.68□□□□□ -1.5
CDH15P55291 RPL12P48-201ENST00000605620 304 ntBASIC5.68□□□□□ -1.5
CDH15P55291 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH15P55291 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH15P55291 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH15P55291 AC097460.3-201ENST00000623099 442 ntBASIC5.68□□□□□ -1.5
CDH15P55291 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH15P55291 AC106858.1-201ENST00000637497 429 ntBASIC5.68□□□□□ -1.5
CDH15P55291 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH15P55291 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH15P55291 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH15P55291 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH15P55291 KARSP1-201ENST00000451871 1752 ntBASIC5.67□□□□□ -1.5
CDH15P55291 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH15P55291 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH15P55291 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDH15P55291 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CDH15P55291 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH15P55291 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH15P55291 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH15P55291 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CDH15P55291 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH15P55291 MAPK10-338ENST00000641647 3362 ntBASIC5.67□□□□□ -1.5
CDH15P55291 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDH15P55291 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms