Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 CASC19-281ENST00000642118 1554 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 AC087359.1-201ENST00000508335 1740 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 NACA-216ENST00000550952 2922 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXC12P31275 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 AP005901.5-201ENST00000545779 1796 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXC12P31275 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HOXC12P31275 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
HOXC12P31275 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 AP003119.3-201ENST00000566747 4192 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
HOXC12P31275 SNORA70.8-201ENST00000384231 136 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 Y_RNA.559-201ENST00000384686 107 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 GEMIN2P2-201ENST00000418195 715 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 PAICSP7-201ENST00000419829 962 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AL593856.1-201ENST00000419949 805 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 GTF2IP23-201ENST00000423746 351 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 DPY19L1P2-201ENST00000426647 915 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC12P31275 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 FTH1P16-201ENST00000435241 552 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AL606662.1-201ENST00000445763 553 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 RHEBP2-201ENST00000450289 600 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 VN1R32P-201ENST00000452234 905 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 RPL21P134-201ENST00000453468 483 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXC12P31275 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXC12P31275 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC12P31275 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC12P31275 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC12P31275 GAPDHP36-201ENST00000480688 918 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AC068724.1-201ENST00000487100 792 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 AC104090.1-201ENST00000506341 1171 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 CHCHD2P7-201ENST00000508008 452 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AC008868.1-201ENST00000509786 737 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 AC008837.2-201ENST00000513076 418 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AC107952.1-201ENST00000524200 376 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 AP001646.2-201ENST00000528645 1156 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 AC024405.1-201ENST00000532521 1042 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 UBE2NP1-201ENST00000545592 458 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AC016144.1-201ENST00000548175 1087 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC12P31275 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXC12P31275 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC12P31275 AC116553.2-201ENST00000564203 463 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 AC138207.8-204ENST00000579588 527 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 PRR13P5-201ENST00000596581 442 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 BNIP3P26-201ENST00000600827 554 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AL139286.2-201ENST00000606838 396 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AP002345.2-201ENST00000609961 904 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AL158063.1-201ENST00000615349 536 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HOXC12P31275 AC006338.2-201ENST00000616864 791 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC12P31275 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC12P31275 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 NCLP2-201ENST00000416078 1462 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC12P31275 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HOXC12P31275 AC011503.2-201ENST00000594230 1500 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 MFSD8-256ENST00000641949 1640 ntBASIC6.38□□□□□ -1.39
HOXC12P31275 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms