Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 POLR2KP1-201ENST00000553226 168 ntBASIC7.97□□□□□ -1.13
RFX1P22670 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.97□□□□□ -1.13
RFX1P22670 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.97□□□□□ -1.13
RFX1P22670 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.97□□□□□ -1.13
RFX1P22670 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 OR5AH1P-201ENST00000595968 283 ntBASIC7.97□□□□□ -1.13
RFX1P22670 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 AL513477.2-201ENST00000607858 568 ntBASIC7.97□□□□□ -1.13
RFX1P22670 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 CLUHP10-201ENST00000631979 980 ntBASIC7.97□□□□□ -1.13
RFX1P22670 AC003992.1-201ENST00000635364 557 ntBASIC7.97□□□□□ -1.13
RFX1P22670 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.97□□□□□ -1.13
RFX1P22670 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RFX1P22670 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
RFX1P22670 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.97□□□□□ -1.13
RFX1P22670 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.97□□□□□ -1.13
RFX1P22670 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RFX1P22670 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.96□□□□□ -1.13
RFX1P22670 AC012078.1-201ENST00000405035 1646 ntBASIC7.96□□□□□ -1.13
RFX1P22670 KYNUP1-201ENST00000466683 1406 ntBASIC7.96□□□□□ -1.13
RFX1P22670 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
RFX1P22670 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
RFX1P22670 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.96□□□□□ -1.13
RFX1P22670 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC7.96□□□□□ -1.13
RFX1P22670 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RFX1P22670 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RFX1P22670 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.96□□□□□ -1.14
RFX1P22670 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RFX1P22670 AC005261.2-201ENST00000593427 4258 ntBASIC7.96□□□□□ -1.14
RFX1P22670 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
RFX1P22670 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RFX1P22670 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RFX1P22670 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RFX1P22670 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
RFX1P22670 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.96□□□□□ -1.14
RFX1P22670 USP9YP33-201ENST00000412220 421 ntBASIC7.96□□□□□ -1.14
RFX1P22670 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.96□□□□□ -1.14
RFX1P22670 MTND1P23-201ENST00000416931 372 ntBASIC7.96□□□□□ -1.14
RFX1P22670 PPIAP23-201ENST00000420099 497 ntBASIC7.96□□□□□ -1.14
RFX1P22670 AL137845.2-201ENST00000444292 988 ntBASIC7.96□□□□□ -1.14
RFX1P22670 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC7.96□□□□□ -1.14
RFX1P22670 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.96□□□□□ -1.14
RFX1P22670 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.96□□□□□ -1.14
RFX1P22670 CFTRP1-201ENST00000456646 183 ntBASIC7.96□□□□□ -1.14
RFX1P22670 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC7.96□□□□□ -1.14
RFX1P22670 SNORA35.1-201ENST00000458908 128 ntBASIC7.96□□□□□ -1.14
RFX1P22670 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RFX1P22670 AC074386.1-206ENST00000487102 761 ntBASIC7.96□□□□□ -1.14
RFX1P22670 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.96□□□□□ -1.14
RFX1P22670 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.96□□□□□ -1.14
RFX1P22670 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.96□□□□□ -1.14
RFX1P22670 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC7.96□□□□□ -1.14
RFX1P22670 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.96□□□□□ -1.14
RFX1P22670 AC126323.4-201ENST00000566935 234 ntBASIC7.96□□□□□ -1.14
RFX1P22670 VN1R92P-201ENST00000598511 928 ntBASIC7.96□□□□□ -1.14
RFX1P22670 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.96□□□□□ -1.14
RFX1P22670 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.96□□□□□ -1.14
RFX1P22670 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
RFX1P22670 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.96□□□□□ -1.14
RFX1P22670 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.96□□□□□ -1.14
RFX1P22670 AC005899.6-201ENST00000620729 297 ntBASIC7.96□□□□□ -1.14
RFX1P22670 AC007347.2-201ENST00000623044 180 ntBASIC7.96□□□□□ -1.14
RFX1P22670 AC022743.1-201ENST00000624990 664 ntBASIC7.96□□□□□ -1.14
RFX1P22670 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.96□□□□□ -1.14
RFX1P22670 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.96□□□□□ -1.14
RFX1P22670 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.96□□□□□ -1.14
RFX1P22670 AL023806.3-201ENST00000638502 2704 ntBASIC7.96□□□□□ -1.14
RFX1P22670 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
RFX1P22670 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RFX1P22670 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RFX1P22670 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RFX1P22670 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
RFX1P22670 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.96□□□□□ -1.14
RFX1P22670 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.96□□□□□ -1.14
RFX1P22670 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.96□□□□□ -1.14
RFX1P22670 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.95□□□□□ -1.14
RFX1P22670 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
RFX1P22670 CASC19-260ENST00000641828 2001 ntBASIC7.95□□□□□ -1.14
RFX1P22670 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.95□□□□□ -1.14
RFX1P22670 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms