Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 OR7E91P-202ENST00000642062 1198 ntBASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CSB-PGBD3P0DP91 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 RNU5E-4P-201ENST00000364931 120 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC004386.1-201ENST00000393214 761 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 RN7SKP278-201ENST00000410504 342 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 RN7SKP296-201ENST00000411185 341 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 ZNF736P2Y-201ENST00000416040 1279 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 IPPKP1-201ENST00000422501 768 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 MTCO2P16-201ENST00000436962 677 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 TVP23CP1-201ENST00000450317 639 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 NAA50-206ENST00000493454 964 ntTSL 2 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC105420.1-201ENST00000504389 582 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC010460.1-201ENST00000507087 466 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC011411.1-201ENST00000509592 876 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 RNA5SP418-201ENST00000515951 117 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 IGKV3D-34-201ENST00000522638 302 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC087575.1-201ENST00000585087 229 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC083760.1-201ENST00000589621 670 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AL603755.1-201ENST00000619504 163 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 AC073530.2-201ENST00000623987 261 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 OR8G3P-202ENST00000641572 1255 ntBASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.84□□□□□ -0.99
CSB-PGBD3P0DP91 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.84□□□□□ -1
CSB-PGBD3P0DP91 NEK2P4-201ENST00000425793 1329 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 ZNF542P-204ENST00000482727 1305 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 LYPLA1P3-201ENST00000402650 695 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 TANK-206ENST00000406287 875 ntTSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 RN7SKP232-201ENST00000410170 290 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 RNU4-72P-201ENST00000410754 173 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 RPL26P37-201ENST00000411983 438 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 CDY17P-201ENST00000414121 1282 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 MTCO3P41-201ENST00000414801 328 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 NENFP1-201ENST00000419476 466 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 RPL7AP14-201ENST00000424041 802 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AL354707.3-201ENST00000427308 331 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC083862.1-201ENST00000427378 1242 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 CDY8P-201ENST00000428380 1279 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 DNAJA1P6-201ENST00000437347 354 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms