Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 AL136131.3-201ENST00000607600 188 ntBASIC4.18□□□□□ -1.74
SH2D1AO60880 MIR6885-201ENST00000612241 66 ntBASIC4.18□□□□□ -1.74
SH2D1AO60880 AC090607.5-201ENST00000615692 224 ntBASIC4.18□□□□□ -1.74
SH2D1AO60880 AL136228.1-201ENST00000622221 319 ntBASIC4.18□□□□□ -1.74
SH2D1AO60880 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.18□□□□□ -1.74
SH2D1AO60880 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.18□□□□□ -1.74
SH2D1AO60880 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SH2D1AO60880 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SH2D1AO60880 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SH2D1AO60880 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
SH2D1AO60880 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
SH2D1AO60880 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.18□□□□□ -1.74
SH2D1AO60880 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
SH2D1AO60880 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
SH2D1AO60880 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.18□□□□□ -1.74
SH2D1AO60880 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SH2D1AO60880 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SH2D1AO60880 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.18□□□□□ -1.74
SH2D1AO60880 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
SH2D1AO60880 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SH2D1AO60880 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.18□□□□□ -1.74
SH2D1AO60880 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.18□□□□□ -1.74
SH2D1AO60880 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SH2D1AO60880 AC125336.1-201ENST00000508893 2827 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 PWAR1-201ENST00000624188 2414 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH2D1AO60880 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.17□□□□□ -1.74
SH2D1AO60880 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.17□□□□□ -1.74
SH2D1AO60880 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH2D1AO60880 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SH2D1AO60880 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
SH2D1AO60880 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH2D1AO60880 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.17□□□□□ -1.74
SH2D1AO60880 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH2D1AO60880 MIR431-201ENST00000385266 114 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 RNA5SP198-201ENST00000410376 127 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 RPS6P23-201ENST00000413224 722 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 AC017078.1-201ENST00000416146 368 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.17□□□□□ -1.74
SH2D1AO60880 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.17□□□□□ -1.74
SH2D1AO60880 GAPDHP75-201ENST00000433910 943 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH2D1AO60880 OR52E3P-201ENST00000452083 936 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.17□□□□□ -1.74
SH2D1AO60880 RPS4XP17-201ENST00000479057 754 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 AC005017.1-201ENST00000482002 490 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 AL158068.1-201ENST00000506116 616 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.17□□□□□ -1.74
SH2D1AO60880 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.17□□□□□ -1.74
SH2D1AO60880 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC4.17□□□□□ -1.74
SH2D1AO60880 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.17□□□□□ -1.74
SH2D1AO60880 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.17□□□□□ -1.74
SH2D1AO60880 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.17□□□□□ -1.74
SH2D1AO60880 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.17□□□□□ -1.74
SH2D1AO60880 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.17□□□□□ -1.74
SH2D1AO60880 MIR4260-201ENST00000583107 67 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 AC008507.3-201ENST00000585753 472 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.17□□□□□ -1.74
SH2D1AO60880 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.17□□□□□ -1.74
SH2D1AO60880 AC008833.1-201ENST00000611633 691 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH2D1AO60880 AC012676.3-201ENST00000614983 479 ntBASIC4.17□□□□□ -1.74
SH2D1AO60880 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SH2D1AO60880 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.17□□□□□ -1.74
SH2D1AO60880 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.17□□□□□ -1.74
SH2D1AO60880 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SH2D1AO60880 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.17□□□□□ -1.74
SH2D1AO60880 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.17□□□□□ -1.74
SH2D1AO60880 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH2D1AO60880 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SH2D1AO60880 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SH2D1AO60880 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SH2D1AO60880 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SH2D1AO60880 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SH2D1AO60880 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SH2D1AO60880 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SH2D1AO60880 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SH2D1AO60880 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SH2D1AO60880 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.16□□□□□ -1.74
SH2D1AO60880 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
SH2D1AO60880 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.16□□□□□ -1.74
SH2D1AO60880 AL078621.3-201ENST00000623707 2042 ntBASIC4.16□□□□□ -1.74
SH2D1AO60880 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SH2D1AO60880 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SH2D1AO60880 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SH2D1AO60880 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SH2D1AO60880 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SH2D1AO60880 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SH2D1AO60880 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.16□□□□□ -1.74
SH2D1AO60880 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SH2D1AO60880 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SH2D1AO60880 PPIAP9-201ENST00000403866 498 ntBASIC4.16□□□□□ -1.74
SH2D1AO60880 AL096711.1-201ENST00000404780 554 ntBASIC4.16□□□□□ -1.74
SH2D1AO60880 AL133260.1-201ENST00000405720 405 ntBASIC4.16□□□□□ -1.74
SH2D1AO60880 RNA5SP431-201ENST00000410312 120 ntBASIC4.16□□□□□ -1.74
SH2D1AO60880 AL035422.1-201ENST00000414193 397 ntBASIC4.16□□□□□ -1.74
SH2D1AO60880 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.16□□□□□ -1.74
SH2D1AO60880 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.16□□□□□ -1.74
SH2D1AO60880 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.16□□□□□ -1.74
SH2D1AO60880 AC099782.1-201ENST00000425889 474 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms