Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 KRT18P16-201ENST00000510337 1294 ntBASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 RARRES2P10-201ENST00000564312 460 ntBASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 AF186192.3-201ENST00000583427 947 ntBASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
TNFRSF11AQ9Y6Q6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 SAPCD2P4-201ENST00000424595 1171 ntBASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 AL049637.2-201ENST00000641778 930 ntBASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 AP001271.2-201ENST00000624018 1556 ntBASIC24.16■■□□□ 1.46
TNFRSF11AQ9Y6Q6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 AC012618.2-201ENST00000428058 849 ntBASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
TNFRSF11AQ9Y6Q6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.14■■□□□ 1.46
TNFRSF11AQ9Y6Q6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
TNFRSF11AQ9Y6Q6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TNFRSF11AQ9Y6Q6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TNFRSF11AQ9Y6Q6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.14■■□□□ 1.45
TNFRSF11AQ9Y6Q6 YBX1P10-201ENST00000444752 975 ntBASIC24.14■■□□□ 1.45
TNFRSF11AQ9Y6Q6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC24.14■■□□□ 1.45
TNFRSF11AQ9Y6Q6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.14■■□□□ 1.45
TNFRSF11AQ9Y6Q6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TNFRSF11AQ9Y6Q6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TNFRSF11AQ9Y6Q6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.14■■□□□ 1.45
TNFRSF11AQ9Y6Q6 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TNFRSF11AQ9Y6Q6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 C1QL1P1-201ENST00000568105 661 ntBASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 MIR4497-201ENST00000583208 89 ntBASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.12■■□□□ 1.45
TNFRSF11AQ9Y6Q6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms