Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAPPC1Q9Y5R8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 WIZP1-201ENST00000531444 2299 ntBASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 AC055733.4-201ENST00000638462 1354 ntBASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 MKRN4P-201ENST00000444706 1521 ntBASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC1Q9Y5R8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 BX119927.1-201ENST00000636596 1552 ntBASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC1Q9Y5R8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC1Q9Y5R8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms