Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB13Q9Y5F0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHB13Q9Y5F0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHB13Q9Y5F0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB13Q9Y5F0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 SERPINA7P1-201ENST00000443077 631 ntBASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB13Q9Y5F0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 MIR4651-201ENST00000582622 73 ntBASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB13Q9Y5F0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms