Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 RN7SL471P-201ENST00000580476 299 ntBASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 AL023875.1-201ENST00000640777 796 ntBASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 AC099778.1-201ENST00000568593 1911 ntBASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 AC112907.3-201ENST00000577781 2400 ntBASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPH3AQ9Y2J0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 PNN-205ENST00000556530 601 ntTSL 2 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 MTDHP1-201ENST00000605323 784 ntBASIC18■□□□□ 0.47
RPH3AQ9Y2J0 FAM197Y4-202ENST00000622692 608 ntBASIC18■□□□□ 0.47
RPH3AQ9Y2J0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18■□□□□ 0.47
RPH3AQ9Y2J0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 PRKY-204ENST00000533551 1019 ntBASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPH3AQ9Y2J0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 RPPH1-201ENST00000516869 333 ntBASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 AL121906.2-201ENST00000621597 723 ntBASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPH3AQ9Y2J0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms