Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 AC133681.1-201ENST00000465482 601 ntBASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 AL049637.2-201ENST00000641778 930 ntBASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 KRT17P2-201ENST00000300992 1314 ntBASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FNDC3AQ9Y2H6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FNDC3AQ9Y2H6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FNDC3AQ9Y2H6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.08■□□□□ 0.8
FNDC3AQ9Y2H6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 AC120498.8-201ENST00000614275 531 ntBASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 AC006557.6-201ENST00000623071 864 ntBASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FNDC3AQ9Y2H6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
FNDC3AQ9Y2H6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 KRASP1-201ENST00000407852 552 ntBASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 TSPY15P-201ENST00000457163 923 ntBASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FNDC3AQ9Y2H6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FNDC3AQ9Y2H6 AC099778.1-201ENST00000568593 1911 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms