Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX2IPQ9Y2D8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX2IPQ9Y2D8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX2IPQ9Y2D8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSX2IPQ9Y2D8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 AC116562.2-201ENST00000507042 360 ntBASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 AC145285.6-201ENST00000604632 637 ntBASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 CR392000.1-201ENST00000624770 1228 ntBASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSX2IPQ9Y2D8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.12■□□□□ 0.97
SSX2IPQ9Y2D8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.12■□□□□ 0.97
SSX2IPQ9Y2D8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX2IPQ9Y2D8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SSX2IPQ9Y2D8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SSX2IPQ9Y2D8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SSX2IPQ9Y2D8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX2IPQ9Y2D8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX2IPQ9Y2D8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSX2IPQ9Y2D8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.12■□□□□ 0.97
SSX2IPQ9Y2D8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.12■□□□□ 0.97
SSX2IPQ9Y2D8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 AP006587.1-201ENST00000534129 1502 ntBASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSX2IPQ9Y2D8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 TMPOP1-202ENST00000424642 1267 ntBASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 AC005363.2-201ENST00000618631 242 ntBASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSX2IPQ9Y2D8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 AC079598.2-202ENST00000546624 1451 ntBASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 AL031985.4-201ENST00000642138 673 ntBASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 KRT16P6-202ENST00000425692 1426 ntBASIC21.09■□□□□ 0.97
SSX2IPQ9Y2D8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms