Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 AC010980.2-201ENST00000587099 1412 ntBASIC20■□□□□ 0.79
CHMP2BQ9UQN3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 AC007322.1-201ENST00000426983 750 ntBASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 AL589743.5-201ENST00000616611 1050 ntBASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 AC231657.2-201ENST00000624556 255 ntBASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP2BQ9UQN3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 KRT17P1-201ENST00000399211 1546 ntBASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 AC026271.2-201ENST00000428091 497 ntBASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 C2orf69P4-201ENST00000565394 541 ntBASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.98■□□□□ 0.79
CHMP2BQ9UQN3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 AC093787.1-201ENST00000450396 207 ntBASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP2BQ9UQN3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2BQ9UQN3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
CHMP2BQ9UQN3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP2BQ9UQN3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2BQ9UQN3 AC023632.3-201ENST00000521633 145 ntBASIC19.96■□□□□ 0.79
CHMP2BQ9UQN3 RARRES2P6-201ENST00000567333 442 ntBASIC19.96■□□□□ 0.79
CHMP2BQ9UQN3 OR10C1-204ENST00000622521 1039 ntBASIC19.96■□□□□ 0.79
CHMP2BQ9UQN3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2BQ9UQN3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2BQ9UQN3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CHMP2BQ9UQN3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms