Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 AC016405.3-201ENST00000607710 860 ntBASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 OR10C1-204ENST00000622521 1039 ntBASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 AC008694.1-202ENST00000636953 945 ntBASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VTI1BQ9UEU0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 RARRES2P4-201ENST00000514074 484 ntBASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VTI1BQ9UEU0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 LINC01465-201ENST00000408887 1940 ntBASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 NCF1B-203ENST00000435988 1254 ntBASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 AL031963.3-201ENST00000606441 850 ntBASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 AC093503.3-201ENST00000624917 2352 ntBASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.3■□□□□ 0.68
VTI1BQ9UEU0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 AL512625.2-201ENST00000417533 625 ntBASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
VTI1BQ9UEU0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 KRT8P20-201ENST00000423953 1409 ntBASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 AF201337.1-201ENST00000520239 748 ntBASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VTI1BQ9UEU0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms