Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPARGC1AQ9UBK2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPARGC1AQ9UBK2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 AL121829.2-201ENST00000620908 328 ntBASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.46■□□□□ 0.87
PPARGC1AQ9UBK2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 ABHD17AP1-201ENST00000358206 933 ntBASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 AC006058.3-201ENST00000606217 1069 ntBASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 AC069544.1-201ENST00000609399 999 ntBASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 ITM2C-210ENST00000620962 501 ntBASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 AC124283.5-201ENST00000624661 1809 ntBASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 PHGDH-210ENST00000641115 1638 ntBASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.45■□□□□ 0.86
PPARGC1AQ9UBK2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 AC116351.2-201ENST00000606540 1585 ntBASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 AL121906.2-201ENST00000621597 723 ntBASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 AC073648.6-201ENST00000641589 218 ntBASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PPARGC1AQ9UBK2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 AL691432.2-201ENST00000607222 2038 ntBASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 AC128676.1-201ENST00000454392 318 ntBASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PPARGC1AQ9UBK2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
PPARGC1AQ9UBK2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms