Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 AC105036.2-201ENST00000569468 176 ntBASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 BCL2-203ENST00000589955 5011 ntBASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.32■□□□□ 0.2
LIN7CQ9NUP9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 AC083906.2-201ENST00000511578 360 ntBASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 TNXA-203ENST00000507684 2038 ntBASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
LIN7CQ9NUP9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 CYP21A1P-202ENST00000354927 1481 ntBASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 KRT16P6-202ENST00000425692 1426 ntBASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 MCRIP2P1-201ENST00000394346 511 ntBASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 SLC29A4P1-201ENST00000398760 971 ntBASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIN7CQ9NUP9 MKRN4P-201ENST00000444706 1521 ntBASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 AC010980.2-201ENST00000587099 1412 ntBASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 Z82202.1-201ENST00000623446 1880 ntBASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.29■□□□□ 0.2
LIN7CQ9NUP9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms